Gene Daci_5287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5287 
Symbol 
ID5750899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5856176 
End bp5857489 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content69% 
IMG OID641300412 
ProductDNA-directed DNA polymerase 
Protein accessionYP_001566301 
Protein GI160900719 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGTT GCCGCAATAA TGGCGGCGTG CCTGAAACGA CACCCACGAC ACCCGCAAGC 
CCTGCCGATG CTGCGCCCCC GCGCCGCATC GCCCACCTGG ACATGGACGC CTTCTATGCC
TCGGTGGAAC TGCTGCGCTA TCCGCAGCTC AAGGGGCTGC CCGTGGTCAT CGGCGGCGGA
CGCCGCGCGC ACGACGAGGC GCTGGACGCG CGCTACGCCG GGCGGCTGCA CGAGATTCCG
GTGGACGAGT TCTCGCGCCT CAAGGACTAC GTGGGCCGGG GCGTGATCAC CACGGCCACT
TACCCGGCGC GCCAGTTCGG CGTGGGCTCG GCCATGGGCA TGATGAAGGC TGCGCGCCTG
TGTCCCCAGG CCATCCTGCT GCCCGTGGAC TTTGCCGAGG TGCGGCGCTT CTCGCGCATG
TTCAAGGAAA TCATCGTCTC CATCGCCCCG CTGATGGAGG ACCGCGGCGT GGACGAGGTC
TACATCGACT TCACCGACGT GCCCGGCGGC CAGCGCGAGG GCGGGCGCGT GCTGGCCCGG
CTGATCCAGA AAACCATCAC CGACGCCACG GGCCTGACCT GCTCCATCGG CGTGGCGCCC
AACAAGCTGC TGGCCAAGAT GGCCAGCGAA TTCAACAAGC CCAACGGCAT CTCCATCGTC
CAGCCCGACG ATCTGCAGGC CGTGATCTGG CCGCTGGCCT GCCGCAAGAT CAACGGCATA
GGCCCCAAGG CCGACGCCAA GCTGCAATCG CTGGGCATAC AGACCATTGG CGAGCTGGCC
AAGCAAAGCC TGCCCCAGCT CGTGCAGTGG TTCGGCCGCG CCTACGGCAA CTGGCTGCAT
GGCGTGTCCT GGGGGCGCGA CGAGCGGCCC GTGGTCACGC ACAGCGAGCC CGTCTCCATG
AGCCGCGAAA CCACCTTCGA GCGCGACCTG CACGCCGTGC GCGACCGGGC CGAACTGAGC
GCCATCTTCA CCGACCTGTG CGAACGCCTG GCCCAGGACC TGCAGCGCAA GGGCTACATG
GGCCGCACCG TCGGCATCAA GCTGCGCTAC GACGACTTCA AGACCGCCAC GCGCGACCAC
ACGCTGGAGC TGCCCATGGC CGATGCCGCC ACCCTGCGCC GCGCCGCAGG CCAATGCCTC
AAGCGCGTGC CCCTGGCCAA GCGGCTGCGC CTGCTGGGCG TGCGCGTGGG CAACCTCGTT
CGCACGGCCG ATTGGGAGGC CACCGCCCAC GACCCGCTGG CGCGCGAGCA ACTGCTCAGG
GGACCGGCCC AACCCGCGCC GGACAGCGAT CCCTTTACAC CTCAACTGTT CTGA
 
Protein sequence
MHSCRNNGGV PETTPTTPAS PADAAPPRRI AHLDMDAFYA SVELLRYPQL KGLPVVIGGG 
RRAHDEALDA RYAGRLHEIP VDEFSRLKDY VGRGVITTAT YPARQFGVGS AMGMMKAARL
CPQAILLPVD FAEVRRFSRM FKEIIVSIAP LMEDRGVDEV YIDFTDVPGG QREGGRVLAR
LIQKTITDAT GLTCSIGVAP NKLLAKMASE FNKPNGISIV QPDDLQAVIW PLACRKINGI
GPKADAKLQS LGIQTIGELA KQSLPQLVQW FGRAYGNWLH GVSWGRDERP VVTHSEPVSM
SRETTFERDL HAVRDRAELS AIFTDLCERL AQDLQRKGYM GRTVGIKLRY DDFKTATRDH
TLELPMADAA TLRRAAGQCL KRVPLAKRLR LLGVRVGNLV RTADWEATAH DPLAREQLLR
GPAQPAPDSD PFTPQLF