| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5284 |
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| Symbol | |
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| ID | 5750896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5852513 |
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| End bp | 5853397 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641300409 |
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| Product | procollagen-proline dioxygenase |
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| Protein accession | YP_001566298 |
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| Protein GI | 160900716 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.107996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCA AATCCTCACC AGATTCCCAG ACCGCCGCAC AGGACCTGCC CGTGGGTCTC
ACGCCTGAAC TCATGCAATG GGTGCGCGAC CAGCGCGCAT CCGGCATAGG GCCTGCGGCC
CTGCTGCGCT CCATGCGCGA CGTGGGCTGG AGCGAAGAAC TGGCAAGGCG GGCGCTGGAC
CTGCCCGAAC AGGGCGAGGT GTCGCCACCG GCCGTCGTCG TCTCGGCCTC GAGCCTGCCC
GAACCGGACC TTGCCCAGGA CCCCAGCAGC ATCGATGTCG GCGACCGTCA GGTCCAGGTG
CTGGTCAGCA TGCGCAACCC GCGCATCGTG GTCTTCGGCA ACCTGCTCTC GCACGAGGAG
TGCGACGCCA TCATCGCCGC CGCGCGTCCG CGCATGGCGC GCTCGCTCAC GGTGGCCACG
CAAAGCGGCG GCGAAGAGAT CAATGACGAC CGAACCAGCA ACGGCATGTT CTTCCAGCGC
GGGGAAACCG GCATCGTCAG CCAGCTGGAA GAACGCATCG CCCGCCTGTT GCGCTGGCCG
CTGGACCATG GCGAAGGCCT GCAGGTGCTG CACTACGGCC CTGGCGCCGA ATACAAGCCC
CACCACGACT ACTTCGCGCC CGGCGAACCC GGCACGCCCA CCATCCTCAA GCGCGGCGGC
CAGCGCGTGG GCACCCTGGT CATCTACCTG AACGAGCCCG AACGGGGCGG CGCCACCATC
TTTCCCGAAG TGCCGCTGCA AGTCGTGCCG CGCCGGGGCA ACGCCGTCTT CTTCAGCTAT
GAGCGCCCCG ACCCCTCCAC GCGTACCCTG CACGGCGGCG CGCCCGTGCT GGCCGGCGAA
AAATGGATCG CCACCAAATG GCTGCGCGAA CGCGAATTCC ACTGA
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| Protein sequence | MSLKSSPDSQ TAAQDLPVGL TPELMQWVRD QRASGIGPAA LLRSMRDVGW SEELARRALD
LPEQGEVSPP AVVVSASSLP EPDLAQDPSS IDVGDRQVQV LVSMRNPRIV VFGNLLSHEE
CDAIIAAARP RMARSLTVAT QSGGEEINDD RTSNGMFFQR GETGIVSQLE ERIARLLRWP
LDHGEGLQVL HYGPGAEYKP HHDYFAPGEP GTPTILKRGG QRVGTLVIYL NEPERGGATI
FPEVPLQVVP RRGNAVFFSY ERPDPSTRTL HGGAPVLAGE KWIATKWLRE REFH
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