Gene Daci_5283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5283 
Symbol 
ID5750895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5851647 
End bp5852432 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content65% 
IMG OID641300408 
Producthypothetical protein 
Protein accessionYP_001566297 
Protein GI160900715 
COG category[S] Function unknown 
COG ID[COG3022] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0804357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTGC TGCTCTCCCC CGCCAAATCG CTGGACTACG ACACCCCACT GCCCCCGAAA 
CTGCCGCACA CGCTTCCCGT CTTCTCCGAA CAGCCGCTGG AGCTGATCGA AGTGCTGCGC
CGCCAGTCGC CCCAGCAACT GTCGGAACTG ATGGGCATCA GCGACAAGCT GGCCGCGCTC
AACGTGGCGC GCTACGAGGC CTTCAGCCCG CGCTTCACGG CCACCAACGC CCGGCAGGCG
CTGCTGGCCT TCAACGGCGA TGTCTACGAG GGCCTGCAGG CACGCAGCCT GGATGCCGAG
GACCTGGACT GGGCCCAGCA GCACCTGGCC ATCCTCAGCG GCCTGTACGG CGTGCTGCGC
CCGCTGGACC GCATGCAGCC CTACCGCCTG GAAATGGGCA CGCGGCTGGA AACCGCGCAT
GGCAGCAATC TCTACCAGTT CTGGGGCAGC CGCATTGCCG AGCACCTGAA CCAGCGCGCG
GCCCGGCAGC CGGCGGGCGA GCGCGTCATC GTCAACCTGG CTTCGCAGGA ATACTTCAAA
TCGGTAGACT TGAAGCACCT CAAGCCCCCG GTGGTGGAAT GCGCATTCGA GGATTACAAG
AACGGCGCCT ACAAGATCAT CAGCTTCCAT GCCAAACGTG CGCGCGGGCT GATGGCACGA
TTTGCCATAC AACGACGCGC TCGCAGCGCG GCTGAACTCG AAGCCTTCGA TCTGGAGGGC
TACGCGCTGG CGCCAGCTTC CTCGACGCCT GCGCGCCTGG TGTTCCGTCG CAAGACCGCT
GACTGA
 
Protein sequence
MLLLLSPAKS LDYDTPLPPK LPHTLPVFSE QPLELIEVLR RQSPQQLSEL MGISDKLAAL 
NVARYEAFSP RFTATNARQA LLAFNGDVYE GLQARSLDAE DLDWAQQHLA ILSGLYGVLR
PLDRMQPYRL EMGTRLETAH GSNLYQFWGS RIAEHLNQRA ARQPAGERVI VNLASQEYFK
SVDLKHLKPP VVECAFEDYK NGAYKIISFH AKRARGLMAR FAIQRRARSA AELEAFDLEG
YALAPASSTP ARLVFRRKTA D