Gene Daci_5275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5275 
Symbol 
ID5750887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5842542 
End bp5843099 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content63% 
IMG OID641300400 
Producthypothetical protein 
Protein accessionYP_001566289 
Protein GI160900707 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGG AATTTTCTGC GGCCCGCCTC GATGTTCGCG CTTTCGCGCA ATCGCAGGGC 
CATCTTCAGG ACCAGACAAC ACTGTCAGTC TTCCCGCGTC TGGCCCAGGA TGCGCAGCCG
GATGCCGGTG ACACGCATGG CCAGGTGCAC TGGCAGGCGG ACGGCGAGCT GGTCGAGCAG
ACCGGCGGCC CCGGTCAGGT GTGGCTGTAT CTGCAGGCCG ATGCCGTCGT GCCCATGGTG
TGCCAGCGCT GCCTAGCCCT GGCGCCCATC ACCCTGCAGG TTGATCGGTC TTTTCGCTTT
GTTGTGGATG AAGCCACGGC CGAGTCCGAG GACGATGAAA GCGATGAGGA CCTGCTGGTG
CTCAGCCGCG AGTTCAATCT GCTCGAACTC ATAGAGGACG AGTTGCTCAT GGAACTGCCC
GTGGTGCCGC GTCACGATGT CTGCCCCGAG TCTGTGAGCC TGCAGTCCAG CGACGCGGAC
TTCGAGCAGG CCATCGAGGA CAAGCCCAAT CCGTTCGCCG TCCTTCGCGG TCTGGATGTG
GGCAAATCTG CAGACTGA
 
Protein sequence
MSKEFSAARL DVRAFAQSQG HLQDQTTLSV FPRLAQDAQP DAGDTHGQVH WQADGELVEQ 
TGGPGQVWLY LQADAVVPMV CQRCLALAPI TLQVDRSFRF VVDEATAESE DDESDEDLLV
LSREFNLLEL IEDELLMELP VVPRHDVCPE SVSLQSSDAD FEQAIEDKPN PFAVLRGLDV
GKSAD