Gene Daci_5272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5272 
Symbol 
ID5750884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5840085 
End bp5841062 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content66% 
IMG OID641300397 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_001566286 
Protein GI160900704 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGCT ACGCACGCAT CACCGGCACG GGCAGCTACC TGCCACCCCG CCGACTCACC 
AATCACGATC TGGCTGCCGA ACTGGCCCAG CGTGGCATCG AGACCTCGGA CGAGTGGATC
GTCGAGCGCA CCGGCATCCA TGCCCGTCAC TTTGCCGCGC CCGACGTGGC CAGCAGCGAT
CTGGCCCTGG AGGCGTCGAA GAAGGCGCTG GAGGCCGCTG GCTGCCAGCC ACAGGACATC
GACCTGATCA TCGTCGCCAC CTCGACGCCC GACATGGTCT TCCCCTCCAC GGCCTGCATC
CTGCAGAACA AGCTTGGCGC CAACGGCTGC GCGGCCTTTG ACGTGCAGGC TGTGTGCAGC
GGCTTTGTCT ACGCTCTCAC GGTGGCCGAT GCCATGATCC AGTCCGGCGC CGCAAGCCGC
GCGCTGGTGG TGGGTTCCGA AGTCTTCAGC CGCATCCTTG ATTTCAACGA CCGCACGACC
TGCGTGCTGT TCGGCGATGG CGCCGGCGCG GTGGTGCTGG AGGCGTCCGA GCAGCCTGGG
ATCCTGGCGT CCGACCTGCA TGCCGATGGC AAGCATGTCG GCATCCTCTG CGTGCCGGGC
AATGTATCCG GTGGACAGGT GCTCGGCGAT CCGCTGCTGA AGATGGATGG ACAGGCCGTG
TTCAAGCTGG CGGTCGGCGT GCTGGAAAAG GCCGCCCGCG CGACGCTGGA CAAGGCCGGG
CTCACCGATG CCGACATCGA CTGGCTGATC CCTCACCAGG CCAACATCCG CATCATGCAA
AGCACGGCGC GCAAGCTCAA GCTGTCCATG GACAAGGTGG TGGTGACCGT GGACCAGCAT
GGCAATACCT CGGCCGCCTC GATCCCGCTG GCGCTGGACC ACGGCGTGCG CAATGGCCAG
GTCAAGCCTG GGCAGACCGT GCTGCTGGAA GGCGTGGGCG GTGGCTTCAC CTGGGGTGCG
GTGCTTCTCA AGATGTGA
 
Protein sequence
MRRYARITGT GSYLPPRRLT NHDLAAELAQ RGIETSDEWI VERTGIHARH FAAPDVASSD 
LALEASKKAL EAAGCQPQDI DLIIVATSTP DMVFPSTACI LQNKLGANGC AAFDVQAVCS
GFVYALTVAD AMIQSGAASR ALVVGSEVFS RILDFNDRTT CVLFGDGAGA VVLEASEQPG
ILASDLHADG KHVGILCVPG NVSGGQVLGD PLLKMDGQAV FKLAVGVLEK AARATLDKAG
LTDADIDWLI PHQANIRIMQ STARKLKLSM DKVVVTVDQH GNTSAASIPL ALDHGVRNGQ
VKPGQTVLLE GVGGGFTWGA VLLKM