Gene Daci_5271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5271 
Symbol 
ID5750883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5839084 
End bp5840085 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content67% 
IMG OID641300396 
Productmalonyl CoA-acyl carrier protein transacylase 
Protein accessionYP_001566285 
Protein GI160900703 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGATG CCTGCCTGTC GGCAGGCTCC CATGGCGCGG CTTTTATTTT TGAAAATATG 
AAGAAGTTTG CATTCGTCTT TCCTGGCCAG GGCTCGCAAT CGGTGGGCAT GCTCGACGGA
TGGGGTGACC ATCCTGTCGT GGCGCAGACG CTGGCCGAAG CGTCCGAGGC GCTGGGTGAA
AACATCGGCC AGCTGATCCA GCAAGGACCG AAGGAAGCCC TGGCGCTCAC CACCAACACC
CAGCCCGTGA TGCTGGTGGC CGGTGTGGCC GCCTGGCGCG TGTGGCAGGC CGAAGGCGGC
GCGCTGCCCG ATGCCGTGGC AGGCCATTCG CTGGGCGAGT ATTCCGCCCT GGTCGCCTCG
GGCGTGCTGA CGCTGTCCCA GGCTGCCCCG CTGGTGCGCC TGCGTGCTGC AGCCATGCAG
GAGGCCGTGC CCGTGGGCAC GGGCGCCATG GCGGCCATCC TGGGCCTGGA CGCCGACAAG
GTGCGCGCAG GCTGCGCCGA GGTCACGGCT GCCCTGGGTG GCGCTGAAGT CGTCGAAGCC
GTCAATTTCA ACGATCCTTC GCAGACCGTG ATCGCCGGCA GCAAGGCTGC TGTCGAAAAG
GCCTGCGAAG CCCTCAAGGC CGCAGGCGCC AAGCGTGCCC TGCCGTTGCC CGTGTCGGCG
CCGTTCCATT CCAGCCTGAT GAAGCCTGCG GCTGAAAAGC TCAAGGCGGC GCTGGCTGCC
ACGGCGCTGG CTGCGCCGCA GATTCCCGTG CTCAACAACA TCGACGTGGC GGTTGAGCAA
GACGCCGACG CCATCCGCGA TGCGCTGTAT CGCCAGGCCT TTGGCCCGGT GCGCTGGGTG
GAGTGCGTGC AGGCCATGAA GGCGCGCGGC ATCGTGCATC TCGTCGAGTG CGGTCCCGGC
AAGGTGCTCA TGGGCCTGAC CAAGCGGATT GACGCGGACC TGACGGCCGC TGCCCTCTAT
GATCCGGCCA CGCTGGCCGA CGTGAAAGAA TCCCTCGCAT GA
 
Protein sequence
MRDACLSAGS HGAAFIFENM KKFAFVFPGQ GSQSVGMLDG WGDHPVVAQT LAEASEALGE 
NIGQLIQQGP KEALALTTNT QPVMLVAGVA AWRVWQAEGG ALPDAVAGHS LGEYSALVAS
GVLTLSQAAP LVRLRAAAMQ EAVPVGTGAM AAILGLDADK VRAGCAEVTA ALGGAEVVEA
VNFNDPSQTV IAGSKAAVEK ACEALKAAGA KRALPLPVSA PFHSSLMKPA AEKLKAALAA
TALAAPQIPV LNNIDVAVEQ DADAIRDALY RQAFGPVRWV ECVQAMKARG IVHLVECGPG
KVLMGLTKRI DADLTAAALY DPATLADVKE SLA