| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5267 |
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| Symbol | |
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| ID | 5750879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5835393 |
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| End bp | 5836064 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641300392 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_001566281 |
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| Protein GI | 160900699 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGCGC CATGGCCGCC GCGGCCCGTC TTCACCGATT TCATGACGCC TCCCGAATTC
CCGCCTTCTT CTGCCGATAG CGACCTGGCT CTGGTCGAGC GCACCAACGC AGGAGACATG
CGGGCCTTCG AGCTGCTGGT CATCAAGTAC CAGCGCCGCA TCGAGCGCCT CATCGGCCGC
ATGGTGCGCG ACGTGGATCT GGTGCCGGAC ATTGCGCAGG AAACCTTCAT CCGCGCCTAT
CGGGCCCTGC ACCAGTTTAG GGGTGATGCC CAGTTCTATA CCTGGCTGTA CCGCATTGCC
GTGAATACTG CCAAGAAGGC GCTGCTGGAC ATGAAGCGCT CGCCGCTGAT CACCGAAAGC
GCGTTACACA ACGGGGATGA CGATGATGAA ACTTCCCGGG TCAGCCAGGA ACTAACCACC
GAAGAAACGC CCGAAACGAT CCTGGCAGCC CAGGAAATTG CCCAGGCAGT CAACGCCGCC
ATGGAGGCTT TGCCCGAGGA TCTCCGACAG GCTGTCACGT TGCGGGAAAT CGAAGGCCTG
AGCTACGAGG AAATCTCGAA CGCCATGGGT TGCCCCATCG GCACCGTGCG CTCACGGATT
TTTCGCGCAC GGGAAGCGAT TTCAGCCAGG GTCAAGCCTT TGCTGGAGCG CCAGTCGGGC
AAGCGTTGGT AG
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| Protein sequence | MTAPWPPRPV FTDFMTPPEF PPSSADSDLA LVERTNAGDM RAFELLVIKY QRRIERLIGR
MVRDVDLVPD IAQETFIRAY RALHQFRGDA QFYTWLYRIA VNTAKKALLD MKRSPLITES
ALHNGDDDDE TSRVSQELTT EETPETILAA QEIAQAVNAA MEALPEDLRQ AVTLREIEGL
SYEEISNAMG CPIGTVRSRI FRAREAISAR VKPLLERQSG KRW
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