| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5265 |
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| Symbol | |
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| ID | 5750877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5832822 |
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| End bp | 5834318 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641300390 |
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| Product | protease Do |
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| Protein accession | YP_001566279 |
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| Protein GI | 160900697 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAGA TGGAAAGGAT GACCATGACC ACTGTTCGAT GGAAGACGCT GCAGTCCTGC
ACACTGGCCG GCGTTCTGGC GCTGGCTGCA GGCAGCGCAG GAATGCTGGT GCCGGTGAGT
GCCGCCCATG CGCAAAGTGG CGCCGTGGTG AGGGGGCTGC CGGACTTCAC CGATCTGGTC
GAGCAGGTCG GCCCTTCCGT GGTCAACATC CGCACGCTGG AGAAGGTATC CGCCAACTCC
GCCGAGGCGC TGGGCATGGA CGAGGACATG CTCGAATTCT TCCGCCGCTT CGGCCTGCCC
GTGCCCAATG TGCCGCGCCA ACGTCCCCAA CCGCGGTCAC AGCCTGACGA GGAGCAGCCG
CGCGGCGTGG GTTCCGGCTT CATCCTGACG GCCGATGGCT TTGTGATGAC CAATGCCCAC
GTGGTTGAAG GCGCTGACGA GGTCATCGTC ACGCTGACCG ACAAGCGCGA GTTCAAGGCC
AAGATCGTGG GCAGCGACAA GCGCACCGAC GTGGCCGTGG TCAAGATCGA CGCCACAGGG
CTGCCTGCCG TGAAGATCGG CGATGTGAAC CGCCTCAAGG TCGGCGAGTG GGTGATGGCC
ATCGGCTCGC CCTTCGGCCT CGACAACTCC GTCACGGCGG GCATCGTCAG TGCCAAGCAG
CGCGATACGG GCGACTATCT GCCGTTCATC CAGACCGATG TGGCCATCAA CCCCGGCAAC
TCGGGCGGCC CGTTGCTGAA CATGCGCGGC GAGGTCGTGG GCATCAACAG CCAGATCTAT
TCGCGCTCCG GCGGCTTCAT GGGTATCAGC TTCGCGATTC CGATCGATGA GGCCGTGCGT
GTCAGCGACC AGCTGCGCGC CACCGGCAAG GTCACGCGGG GCCGCATTGG CGTGCAGATC
GGTCCGGTCA CCAAGGACAT TGCCGAATCC ATTGGCCTGG GCAAGGCGCA GGGCGCACTG
GTCTCGGCCG TCGAACCGGA TTCGCCCGCT GCCAAGGCGG GCGTCGAGGC CGGTGACGTG
ATCATCAAGT TCGACGGCAA GGCCATCGAC AAGGTGGCCG ACCTGCCGCG CCTGGTGGGC
AATACCAAGC CCGGCACACG CAGCACCATC ACCGTCTTCC GTCGCGGCGC AGCCAAGGAT
CTGACCATGG TGATCGCCGA GGTCGAGCCC GACGGCGCGG CTCCGCAGGC CAAGGCCACC
GGCAAGGGCA GCACCCTGGT TTCCCAGCCG CTGGGCCTGA CGCTGGCCGA GCTCACGGAT
GCCCAGAAGA AGGAGCTGGG CATCAAGGGC GGCGTGCGCG TGACGGCTGC CGTCGAGGCT
GCGGCACGTG CGGGCCTGCG CGAAGGCGAC GTGATCCTGC AACTGGCCAA TGTCGAGATC
ACGGGGCTCA AGAGCTTCGA GGCCACGCTG GCCAAGGTGG ACAAGAGCAA GCCCGTGAAC
CTGCTGGTGC GCCGTGGGGA ATGGGCGCAG TACGTGCTGA TCCGTCCGGC GCGCTGA
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| Protein sequence | MIEMERMTMT TVRWKTLQSC TLAGVLALAA GSAGMLVPVS AAHAQSGAVV RGLPDFTDLV
EQVGPSVVNI RTLEKVSANS AEALGMDEDM LEFFRRFGLP VPNVPRQRPQ PRSQPDEEQP
RGVGSGFILT ADGFVMTNAH VVEGADEVIV TLTDKREFKA KIVGSDKRTD VAVVKIDATG
LPAVKIGDVN RLKVGEWVMA IGSPFGLDNS VTAGIVSAKQ RDTGDYLPFI QTDVAINPGN
SGGPLLNMRG EVVGINSQIY SRSGGFMGIS FAIPIDEAVR VSDQLRATGK VTRGRIGVQI
GPVTKDIAES IGLGKAQGAL VSAVEPDSPA AKAGVEAGDV IIKFDGKAID KVADLPRLVG
NTKPGTRSTI TVFRRGAAKD LTMVIAEVEP DGAAPQAKAT GKGSTLVSQP LGLTLAELTD
AQKKELGIKG GVRVTAAVEA AARAGLREGD VILQLANVEI TGLKSFEATL AKVDKSKPVN
LLVRRGEWAQ YVLIRPAR
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