| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5247 |
|---|
| Symbol | |
|---|
| ID | 5750859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 5814804 |
|---|
| End bp | 5815478 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641300372 |
|---|
| Product | peptidase S16 lon domain-containing protein |
|---|
| Protein accession | YP_001566261 |
|---|
| Protein GI | 160900679 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.469364 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC CTACCGCACT GCACTCCCTG CCGCTGTTCC CCCTGGGCAG CGTCCTCTTT
CCCCAAGGCC TGCTGAGCCT TCGCGTCTTT GAAGTCCGCT ACCTGGACAT GATCCGCAAG
TGCGAGCGCA CGGGCGCTCC CTTCGGCGTG GTGGCGCTGC AGGCCGGCAG CGAAGTGCGC
AAGGCCGGCG CGGCCGCCGA GCAATTGCAC GCCGTGGGCA CGCTGGCCCG CATCGTCCAG
TTGCAGCAGC CCCAGCCCGG CCTGCTGCAC CTGCAGTGCG AAGGCACGCA GCGCTTTCGC
ATGCAGGAGC ACCGCCAGCT GCCCCACGGC CTGTGGGTGG CCGATGTGCA GATGCTGCCT
GCCGATGCCG CCGTGCCCAT CCCCGGCCAC CTGCTCGCCA CCGCCCAGGC CCTGGCCCAG
GTGCTGATGC AGCTGCACGC GCGCTCCACA GACGCCGACC ATGCCCGACT GCCCAGCGCC
GAACAGATGG GCGACTGCGG CTGGGTGGCC AACCGCTGGA CCGAGCTGCT GCCCATGCCG
GTCTCCATCA AGCAGCAACT GATGGCGCTG GACAGCCCGC TGGTGCGGCT GGAGCTTGTG
GCCGATGTGC TGGAGCGCAG CGGCATAGGC CATGCCCAGG GCCCGGCACC CGGCTCCCCT
TCCGCCGGGC ACTGA
|
|---|
| Protein sequence | MTAPTALHSL PLFPLGSVLF PQGLLSLRVF EVRYLDMIRK CERTGAPFGV VALQAGSEVR
KAGAAAEQLH AVGTLARIVQ LQQPQPGLLH LQCEGTQRFR MQEHRQLPHG LWVADVQMLP
ADAAVPIPGH LLATAQALAQ VLMQLHARST DADHARLPSA EQMGDCGWVA NRWTELLPMP
VSIKQQLMAL DSPLVRLELV ADVLERSGIG HAQGPAPGSP SAGH
|
|---|
| |