Gene Daci_5246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5246 
Symbol 
ID5750858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5814156 
End bp5814800 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content65% 
IMG OID641300371 
Productprotein of unknown function YGGT 
Protein accessionYP_001566260 
Protein GI160900678 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.924016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGGA TGCGGCAGCT ATCATCCCAT GCTGTGCCAG GGCCGGATGG CCGTGGTCCG 
ATCTTCCTCC CGCAGTCCTA CAACGCCATG CTTTTTCAGA TCGTTTCCTT TTTGCTCGAC
GTGGTCGTTG GCCTGTTGAC CGGCGTCTGC CTGCTGCGCA TGTACATGCA GGCCCAGCGC
GTGCCCTTCG GCAACCCCGT GGGGCAACTG GTGTTTGCGC TGTCCGACTG GATCGTGATG
CCGCTGCGCC GCATCATCAA GCCGGCCGGG CGCTGGGATA TGTCCAGCCT GATCGCCGCC
TTCCTGCTGC AGCTGCTGCA GTTCGTGCTG CTGTGGCTGT TGATGGGTGG GCAGTCCACC
GTGGTTGCCC TGCCCTGGCT GGCGCTGTGC GGCCTGGCGC GCGTGGCGCT GTCGGGCATG
GTGGGCGTGC TGCTGATCTA TGCCATCTTG TCGTGGGTGC AGCCGCAGTC GCCGATGTAT
GGCGTGCTGC AGCGCCTGTC CGAGCCGATG CTGCGGCCCA TCCGCCGTGT TGTTCCGCTG
ATCGGCGGTA TCGATCTGTC GGCACTGGTG GCTCTGGTGC TGCTGCAGAT CGCGCTGATG
GTGCTGGCGT ATATCCAGGG ATCGGGCCTG ATGCTGCTGG CCTGA
 
Protein sequence
MGGMRQLSSH AVPGPDGRGP IFLPQSYNAM LFQIVSFLLD VVVGLLTGVC LLRMYMQAQR 
VPFGNPVGQL VFALSDWIVM PLRRIIKPAG RWDMSSLIAA FLLQLLQFVL LWLLMGGQST
VVALPWLALC GLARVALSGM VGVLLIYAIL SWVQPQSPMY GVLQRLSEPM LRPIRRVVPL
IGGIDLSALV ALVLLQIALM VLAYIQGSGL MLLA