| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5243 |
|---|
| Symbol | |
|---|
| ID | 5750855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 5811069 |
|---|
| End bp | 5812325 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641300368 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_001566257 |
|---|
| Protein GI | 160900675 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAAT ACCAGTACCC TGACGCATCC GGCCACTTCG GCCGCTTCGG CGGCAGCTTT
GCCAGCGAAA CCCTGACACA CGCTCTGACC GAGCTGCGCG ACGCCTACGC CAAGTACCAG
AACGACCCGG AATTCGTTGC CGAATTCCAG TCCGAGCTGG CCCACTTCGT CGGCCGCCCC
TCGCCCGTCT ACCACGCGGC ACGCATGTCG CGCGAGATGG GCGGCGCGCA GATCTACCTC
AAGCGCGAAG ACCTCAACCA CACGGGCGCG CACAAGATCA ACAACGTGAT CGGCCAGGCC
ATGCTCGCCC GGCGCATGGG CAAGCCCCGC ATCATTGCCG AGACGGGCGC CGGCCAGCAC
GGCGTGGCCA CGGCCACCAT CTGCGCGCGC TACGGCCTCG AATGCATCGT CTACATGGGC
GCCGAGGACG TGAAGCGCCA AAGCCCCAAC GTCTACCGCA TGCGCCTGCT GGGCGCCACC
GTGGTGCCGG TGGAGTCGGG CAGCCGCACG CTCAAGGACG CGCTCAACGA GGCCATGCGC
GACTGGGTGG CCAACGTGGA CAACACCTTC TACATCATCG GCACCGTGGC CGGCCCCCAT
CCCTACCCGG CGATGGTGCG CGACTTCCAG AAGGTCATCG GCGAGGAATG CCTGACGCAG
ATGCCCGAAT TCCTGGGCGC CGACCGCCAG CCTGATGCCG TGGTCGCCTG CGTGGGCGGC
GGCAGCAATG CCATGGGCAT CTTCCACCCC TACATCCCGT TCGAGAACAC GCGCCTGATC
GGCGTGGAGG CTGCCGGCGA AGGCCTGGAC AGCGGCAAGC ACTCGGCCTC GCTGCAGCGC
GGCAGCAGCG GCGTGCTGCA CGGCAACCGC ACCTTCATCC TGCAGGACGA GAACGGCCAG
ATCACCGAGA CGCACAGCAT CAGCGCCGGC CTCGACTACC CCGGCGTCGG CCCCGAGCAC
GCCTGGCTGC AGGAACTGGG CCGGGCCCAG TACGTGGGCA TCACCGACCA GGAGGCGCTG
GACGCCTTCC ACTACCTGTG CCGCACCGAA GGCATCATTC CCGCCCTGGA GTCCAGCCAT
GCCGTGGCCT ATGCCATGCA ACTGGCCAAG ACCATGCGCG CCGACCAGTC CATCCTCGTG
AACCTGTCCG GTCGCGGCGA CAAGGACATC GGCACCGTGG CCGACCTCTC GGGCGCCGAT
TACTACGACC GTCCCTCCAT GCGCGGGCTC ACGGTCAAGG GAGGAGCAGC TCAATGA
|
|---|
| Protein sequence | MFEYQYPDAS GHFGRFGGSF ASETLTHALT ELRDAYAKYQ NDPEFVAEFQ SELAHFVGRP
SPVYHAARMS REMGGAQIYL KREDLNHTGA HKINNVIGQA MLARRMGKPR IIAETGAGQH
GVATATICAR YGLECIVYMG AEDVKRQSPN VYRMRLLGAT VVPVESGSRT LKDALNEAMR
DWVANVDNTF YIIGTVAGPH PYPAMVRDFQ KVIGEECLTQ MPEFLGADRQ PDAVVACVGG
GSNAMGIFHP YIPFENTRLI GVEAAGEGLD SGKHSASLQR GSSGVLHGNR TFILQDENGQ
ITETHSISAG LDYPGVGPEH AWLQELGRAQ YVGITDQEAL DAFHYLCRTE GIIPALESSH
AVAYAMQLAK TMRADQSILV NLSGRGDKDI GTVADLSGAD YYDRPSMRGL TVKGGAAQ
|
|---|
| |