Gene Daci_5242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5242 
Symbol 
ID5750854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5810417 
End bp5811091 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID641300367 
Productphosphoribosylanthranilate isomerase 
Protein accessionYP_001566256 
Protein GI160900674 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.98585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGCCG CCGTGGCTGC GGGCACCGAT GCCGTGGGTT TTGTGCTCTA CGCCCCCAGT 
CCGCGCGCCG TGACGGTGCA GCGCGCTGCA GAACTGGCGC GACGCCTGCC GCCCTTCGTG
ACCCCGGTGC TGCTGTTCGT CAATGAAAGC GCCGCCAACG TGATGGCTGC CTGCGCCGCC
ATCCCGGGCG CCTGCGTGCA GTTCCACGGC GACGAGTCCC CCGAGGACTG CCTTGCCGCC
ACATCGGGCG GCACCCGCGC CTTCCTGCGC GCTGCACGCA TTCCCCTTGG TCCCGACGCC
GCGCGCTTCG ACCTCGTAGA ATATGCCCAG CGTTACTCGA AAGCCCAGGC CATACTGCTC
GACGCCCATG TCGACGGCTA TGGTGGTGGC GGAAAAGCAT TCAATTGGTC ACTCCTTCCA
CCAAACGTCG CCTCTCACCT CGTTTTGTCT GGTGGACTCA CGCCTGCAAA CGTGACCGAT
GGCATCTTGC AAGTGCGCCC GCGAGGACTC TCGCTGGCCG TTGATGTCAG TTCCGGCGTC
GAGGCCGATG GTCCCGACGG CAAGCCCCTC AGGGGCATCA AGGACGCCGG CAAGATACAC
CGATTCATCG CCGCCGTGCG CGCGGCCGAT GACCAACTTT TGCAGACAAG CCATGTTCGA
ATACCAGTAC CCTGA
 
Protein sequence
MDAAVAAGTD AVGFVLYAPS PRAVTVQRAA ELARRLPPFV TPVLLFVNES AANVMAACAA 
IPGACVQFHG DESPEDCLAA TSGGTRAFLR AARIPLGPDA ARFDLVEYAQ RYSKAQAILL
DAHVDGYGGG GKAFNWSLLP PNVASHLVLS GGLTPANVTD GILQVRPRGL SLAVDVSSGV
EADGPDGKPL RGIKDAGKIH RFIAAVRAAD DQLLQTSHVR IPVP