| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5241 |
|---|
| Symbol | truA |
|---|
| ID | 5750853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 5809488 |
|---|
| End bp | 5810336 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641300366 |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_001566255 |
|---|
| Protein GI | 160900673 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0101] Pseudouridylate synthase |
|---|
| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTAG CCCTCGGCGT CGCCTACAAC GGCCAGCGCT ACAGCGGCTG GCAAAGCCAG
CTGTCTGGCA ACACCATTCA AGACCATCTC GAAGCGGCCC TGGGCCGCTT TGCCGCTCAG
GAGGTGCACA CCCTCTGCGC GGGCCGCACC GATGCCGGCG TGCACGGCCT CATGCAGGTC
GTCCACTTCG ACACGCCGCT GGACAGGGCC CCGTTCTCCT GGGTCCGTGG CACCAACACC
TTCCTGCCGC CGGACATTGC CGTGCAATGG GCCCAGCCCG TGCCCGATGC CTTCCATTCG
CGCGCCTGTG CCACGGCAAG GCGCTATGCC TATGTGCTGC TGCAATCGCC CGTGCGCCCC
AGCGTGGAGG CCGGGCGCGT GGGCTGGGTG TTCCATGCGC TCGATGGTGA CGCCATGCAG
GCCGCCGCCC GGCACCTGCT GGGCGAGCAC GACTTCAGCT CGTTCCGCGC ATCGGGCTGC
CAGGCCAAGT CCCCCGTCAA GACACTGCAC CGTCTGTCCA TCACCCGCCG CATGGCAGGC
GATGGCGCCC AGATGGCCGC AGCCAGCTCC ATGCGCCCCG GCGATGCGGC CATGGAATGC
TGCTACTGGC GCTTCGAGTT CGAAGGCAGC GCCTTCCTCC ACCACATGGT GCGCAACATC
ATGGGCTGCC TGATCGCCAT CGGCCAGGGC ACGTATGCGC CGCAGTGGAT GCAGCAGGTA
CTGGACGCCC GTTCCCGCGA TGCCGCCGCG CCCACCTTCT CGCCCGACGG CCTGTACTTT
CTGGGCCCCG TATACGATCC TTCATGGGGC CTTCCTTCGC GCAGCCCGGC CTATGATTGG
CTCCCTTGA
|
|---|
| Protein sequence | MRVALGVAYN GQRYSGWQSQ LSGNTIQDHL EAALGRFAAQ EVHTLCAGRT DAGVHGLMQV
VHFDTPLDRA PFSWVRGTNT FLPPDIAVQW AQPVPDAFHS RACATARRYA YVLLQSPVRP
SVEAGRVGWV FHALDGDAMQ AAARHLLGEH DFSSFRASGC QAKSPVKTLH RLSITRRMAG
DGAQMAAASS MRPGDAAMEC CYWRFEFEGS AFLHHMVRNI MGCLIAIGQG TYAPQWMQQV
LDARSRDAAA PTFSPDGLYF LGPVYDPSWG LPSRSPAYDW LP
|
|---|
| |