| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5235 |
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| Symbol | |
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| ID | 5750847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5801145 |
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| End bp | 5802611 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300360 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_001566249 |
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| Protein GI | 160900667 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.71536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCAA AAATTTCCCC ACGACACCAA CCATTCGAGA ACGCCATGGG ACGCACCCTC
TACGACAAGA TCTTCGACGA GCACGTCATC CACACCGAGG ATGACGGCAC CGCCGTCCTC
TACATCGACC GCCACCTGGT GCACGAAGTC ACCAGCCCCC AGGCCTTCGA AGGCCTTCGC
ATGGCCGGCC GCAAGCTGTG GCGCATCAGC TCCGTGGTCG CCACGGCCGA CCACAACACC
CCCACCGACG GCTGGGAGCG CGGCTATGAC GGCATTGCCG ACCCCATCAG CAAGGAACAG
ATCACCACGC TGAACACCAA CATCGGCGAG TTCGGCTCTG CGGCCTTCTT CCCCTTCATG
GACAAGGGTC AGGGCATCGT CCACGTCATG GGCCCCGAGC AGGGCGCCAC CCTGCCCGGC
ATGACCGTGG TCTGCGGCGA CAGCCACACG TCCACGCACG GCGCCTTCGG CGCACTGGCC
CACGGCATCG GCACGTCCGA GGTCGAGCAC GTGATGGCCA CCCAGACCCT GCTGGCCAAG
AAGGCCAAGA ACATGCTGAT CAACGTCAGC GGCAAGGCGG CCCCCGGCAT CACGGCCAAG
GACATCGTGC TGGCCATCAT CGGCAAGATC GGCACGGCCG GCGGCACGGG CTACACCATC
GAGTTCGCCG GCGAAGCCAT CCGTGACCTG AGCATGGAAG GCCGCATGAC GGTCTGCAAC
ATGGCCATCG AAGGCGGCGC GCGCGCAGGC CTGGTGGCCG TGGACGACAA GACCATCCAG
TACGTCAAGG GCCGCCCGCT GGCCCCCACT GGCGCCGAAT GGGATGCCGC CGTCTCCTAC
TGGAAGACGC TGCACTCCGA TGCCGATGCG AAGTTCGACC GCGTGGTCGA GCTGCAGGCC
AGCGAGATCG TGCCGCAGGT CACCTGGGGC ACCTCGCCCG AGATGGTGCT GGGCGTGGAT
GCCCGCGTGC CGGACCCCGA CAAGGAAAAG GATGCCAGCA AGCGCGGCGC CATCGAACGC
GCGCTGACCT ACATGGCGCT GGAGCCCGGC AAGGCGATCG ACGACATCTT CGTGGACAAG
GTCTTCATCG GCTCGTGCAC CAACAGCCGC ATCGAAGACA TGCGCGAGGC CGCCGCCGTG
GTCAAGAAGC TGGGCCAGAA GGTGGCGCGC AACATCAAGC TGGCCATGGT CGTGCCCGGC
TCCGGACTGG TCAAGGAACA GGCCGAGCGC GAAGGCCTGG ACCAGATCTT CAAGGCGGCA
GGCTTTGAAT GGCGCGAGCC CGGCTGCTCC ATGTGCCTGG CCATGAATGC CGACCGCCTG
GAGCCCGGCG AGCGCTGCGC CTCCACCAGC AACCGCAACT TCGAAGGCCG CCAGGGCGCG
GGCGGACGCA CCCACCTGGT GAGCCCCGCC ATGGCTGCAG CCGCCGCCAT CCACGGCCAC
TTCGTGGACA TCCGCAGGTT CTCCTGA
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| Protein sequence | MPPKISPRHQ PFENAMGRTL YDKIFDEHVI HTEDDGTAVL YIDRHLVHEV TSPQAFEGLR
MAGRKLWRIS SVVATADHNT PTDGWERGYD GIADPISKEQ ITTLNTNIGE FGSAAFFPFM
DKGQGIVHVM GPEQGATLPG MTVVCGDSHT STHGAFGALA HGIGTSEVEH VMATQTLLAK
KAKNMLINVS GKAAPGITAK DIVLAIIGKI GTAGGTGYTI EFAGEAIRDL SMEGRMTVCN
MAIEGGARAG LVAVDDKTIQ YVKGRPLAPT GAEWDAAVSY WKTLHSDADA KFDRVVELQA
SEIVPQVTWG TSPEMVLGVD ARVPDPDKEK DASKRGAIER ALTYMALEPG KAIDDIFVDK
VFIGSCTNSR IEDMREAAAV VKKLGQKVAR NIKLAMVVPG SGLVKEQAER EGLDQIFKAA
GFEWREPGCS MCLAMNADRL EPGERCASTS NRNFEGRQGA GGRTHLVSPA MAAAAAIHGH
FVDIRRFS
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