| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5233 |
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| Symbol | |
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| ID | 5750845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5798690 |
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| End bp | 5799940 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641300358 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001566247 |
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| Protein GI | 160900665 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.831763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.86382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATC GATACCCGAC GGGCCTGCGA GCCCTGCCTG CAGGCCTGTC ATTGCTGCTG
GCCGCAGCCC TGTCCTGCAT GGCCGTCCCG GCGTCTGCCA AGCCGCAGCC ACCAGCGAAG
AACACGGCCA AGAGCGGTGC GAAGGCACCG GCCAAACCTG CAGCCAGACC TGCAGCCAAG
CCAGCGGGCA AGGCCGCCGT CAAGACCGGG GGCAAGTCGG CGCCCTCTCC CACCCGCAAT
GCGCCGGCCA AGGCCGCCGC CGCTGGCGTG GCGGCAGGGG CTGTTGCGGC CGGAACTGCC
GCAGCCGCAG TGGGCCATGC ACCCAAGGGT GAGCCCGGCC TGAGCGCGGC CGAGGTTGCA
GCGCTGCACC AGCATGCCGA GCAGGGCGAG GCCAGCGCCC AGTACGCGCT GGGTTCGCTG
TACAAGCGCG GCCAGGGCGT TGCCCCGAGT GCCGAGACGG CGGCCCAGTG GTATGAGAAG
TCTGCGCAGC AGGGCTATGC GCCAGCCCAG TCCGAGCTGG GGTTGATGTA TGCGAATGGC
CGGGGCGTGG CGCGTGACGA TGCCCAGGCC GTGCAGTGGT ATCGCAAGGC TGCCGAGCAG
GGCGATGCCG TGGCCCAGAA CAACCTGGGC CTGATGCTGG CCGAGGGGCG CGGAGCCGCC
AAGGACCCCG CGCAGGCCGT GCAGTGGTTC CAGCGCTCGG CCGAGCAAGG CGAAGCGGCC
GGTCAGTACA GCCTGGGCGT GATGTATGCC ACGGGCCGGG GCGTGGCCGA GGACGTGGGG
CAGGCGCTGC GCTGGTTTGT GGCGGCGGCA GGCCAGGGCC ATGCCGATGC GCAATTCAAT
GCCGGCATGC TCTATGCCGA GGGTGGCGTG GTCGATCGCG ACATGGCGCA GGCCGCCCAC
TGGCTGGAGA AGGCGGCCGA GCAGGGCAAT GCCGCAGCCC AGTCCAACCT GGGCGTGCTG
TATGCCAATG GCCAGGGCGT GCCCGCCAGC GACGAGAAGG CCGCGCGCTG GCTGGAGCGT
GCAGCCCAGC AGGGCGACGC GCTGGCGCAG TCCAATCTCG CCAGTCTTTA TGCGTCGGGC
AAGGGCGTGG AGCGCAGCCT GTCCCAGGCC TATTTCTGGA TGCTGCTGGC GGCGGGCAGG
GACAGCTCGC TGACCGCCAA GCGTGACAGC ATGGCCCAGC CGCTGAGCGC GGCCGAGCGT
GCACGCACCG AGCGCCAGGC GGCGGCCTGG AAGGCCAAAC CCGCTCCCTG A
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| Protein sequence | MNDRYPTGLR ALPAGLSLLL AAALSCMAVP ASAKPQPPAK NTAKSGAKAP AKPAARPAAK
PAGKAAVKTG GKSAPSPTRN APAKAAAAGV AAGAVAAGTA AAAVGHAPKG EPGLSAAEVA
ALHQHAEQGE ASAQYALGSL YKRGQGVAPS AETAAQWYEK SAQQGYAPAQ SELGLMYANG
RGVARDDAQA VQWYRKAAEQ GDAVAQNNLG LMLAEGRGAA KDPAQAVQWF QRSAEQGEAA
GQYSLGVMYA TGRGVAEDVG QALRWFVAAA GQGHADAQFN AGMLYAEGGV VDRDMAQAAH
WLEKAAEQGN AAAQSNLGVL YANGQGVPAS DEKAARWLER AAQQGDALAQ SNLASLYASG
KGVERSLSQA YFWMLLAAGR DSSLTAKRDS MAQPLSAAER ARTERQAAAW KAKPAP
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