Gene Daci_5231 details

Gene Information

• Locus tag: Daci_5231
• Symbol: dnaK
• ID: 5750843
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Delftia acidovorans SPH-1
• Kingdom: Bacteria
• Replicon accession: NC_010002
• Strand: +
• Start bp: 5795431
• End bp: 5797377
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 641300356
• Product: molecular chaperone DnaK
• Protein accession: YP_001566245
• Protein GI: 160900663
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 35
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGAAAAA TCATCGGTAT TGACCTGGGC ACCACCAACA GCTGCGTGGC CATCATGGAC 
GGCAACACCA CGCGCGTGAT CGAGAACAGC GAAGGTGCAC GCACCACGCC GTCGATCATT 
GCCTACCAGG AAGACGGCGA GATCCTCGTC GGCGCCTCGG CCAAGCGCCA GGCCGTCACC 
AACCCCCGCA ACACCATCTA CGCCGCCAAG CGCCTGATCG GCCGCAAGTT CGACGAGAAG 
GAAGTGCAAA AGGACATCGA CCTGATGCCC TACACCATCT CGCGTGCCGA CAACGGCGAC 
GCCTGGGTGG AAGTGCGCGG CCAGAAGCTG GCCCCGCCGC AGATTTCCGC CGAAGTGCTG 
CGCAAGATGA AGAAGACCGC CGAGGACTAC CTGGGCGAGC CCGTGACCGA GGCCGTGATC 
ACCGTGCCCG CGTACTTCAA CGACGCCCAG CGCCAAGCCA CCAAGGACGC CGGCCGCATC 
GCCGGCCTGG AAGTCAAGCG CATCATCAAC GAACCCACGG CGGCGGCCCT GGCCTTCGGC 
CTGGACAAGA CCGACAAGGG TGACCGCAAG ATCGCCGTGT ATGACCTGGG CGGCGGCACC 
TTCGACGTGT CCATCATCGA AATCGCCGAT GTGGACGGCG AAAAGCAGTT CGAAGTGCTG 
TCCACCAACG GCGACACATT CCTGGGCGGC GAAGACTTCG ACCAGCGCAT CATCGACTAC 
ATCATCACCG AGTTCAAGAA GGAACAGGGC GTTGATCTGG CCAAGGATGT GCTGGCCCTG 
CAGCGCCTGA AGGAAGCCGC CGAGAAGGCC AAGATCGAGC TGTCGAACTC GGCCCAGACC 
GACATCAACC TGCCCTACAT CACGGCCGAT GCCTCGGGTC CCAAGCACCT GAACATCAAG 
CTGACCCGCT CCAAGCTGGA AAGCCTGGTC GAGGACCTGA TCGAGCGCAC CATTGCGCCC 
TGCCGCACGG CCATCAAGGA CGCAGGCGTG TCCGTGTCCG ACATCGATGA CGTCATCCTG 
GTCGGCGGCA TGACCCGCAT GCCCAAGGTG CAGGAGAAGG TCAAGGAATT CTTCGGCAAG 
GACCCCCGCA AGGACGTGAA CCCCGACGAA GCCGTGGCCG TGGGCGCCGC CGTGCAGGGC 
CAGGTTCTGT CGGGCGACCG CAAGGACGTG CTGCTGCTGG ACGTGACGCC GCTGTCGCTG 
GGCATCGAGA CGCTGGGTGG CGTGATGACC AAGATGATCA CCAAGAACAC GACCATCCCG 
ACGAAGTTCG CACAGACCTT CTCGACGGCC GACGACAACC AGCCGGCCGT GACCATCAAG 
GTGTTCCAGG GCGAGCGCGA AATGGCTTCG GGCAACAAGA TGCTGGGCGA GTTCAACCTC 
GAAGGCATTC CGCCCGCAGC GCGTGGCGTG CCGCAGATCG AAGTGGCCTT TGACATCGAC 
GCCAACGGCA TCCTGAACGT GTCCGCCAAG GACAAGGCTT CGGGCAAGGA AAACAAGATC 
ACCATCAAGG CGAACTCGGG CCTGTCCGAG GACGAGATCC AGAAGATGGT GAAGGACGCC 
GAGCTGAACG CAGCCGACGA CAAGAAGAAG CTGGAACTGG TCCAGGCCCG CAACCAGGGC 
GAAGCTGCCG TGCACAGCGT CAAGAAGAGC CTGGGCGAGC ATGGCGACAA GCTCGACGCT 
GGCGAGAAGA CCGCCATCGA GAGCGCCGTC AAGGACCTGG AAGAGGCTCT CAAGGGCGAG 
GACAAGGACG CCATCGACGC CAAGACCACG GCGCTGATGA CGGCCAGCCA GAAGCTCGGC 
GAGAAGATGT ACGCCGATGC GCAGGCAGCC GGCGGCCCCG AGGCAGCAGC CGCCGCCGCG 
GCCGGTGCAG CAGGCGCCTC GGCCGGTGCA GCAGCCGCTG ACGACAACGT CGTTGACGCC 
GAAGTCAAGG AAGTCAAGAA GGACTGA 

 

Protein sequence

MGKIIGIDLG TTNSCVAIMD GNTTRVIENS EGARTTPSII AYQEDGEILV GASAKRQAVT 
NPRNTIYAAK RLIGRKFDEK EVQKDIDLMP YTISRADNGD AWVEVRGQKL APPQISAEVL 
RKMKKTAEDY LGEPVTEAVI TVPAYFNDAQ RQATKDAGRI AGLEVKRIIN EPTAAALAFG 
LDKTDKGDRK IAVYDLGGGT FDVSIIEIAD VDGEKQFEVL STNGDTFLGG EDFDQRIIDY 
IITEFKKEQG VDLAKDVLAL QRLKEAAEKA KIELSNSAQT DINLPYITAD ASGPKHLNIK 
LTRSKLESLV EDLIERTIAP CRTAIKDAGV SVSDIDDVIL VGGMTRMPKV QEKVKEFFGK 
DPRKDVNPDE AVAVGAAVQG QVLSGDRKDV LLLDVTPLSL GIETLGGVMT KMITKNTTIP 
TKFAQTFSTA DDNQPAVTIK VFQGEREMAS GNKMLGEFNL EGIPPAARGV PQIEVAFDID 
ANGILNVSAK DKASGKENKI TIKANSGLSE DEIQKMVKDA ELNAADDKKK LELVQARNQG 
EAAVHSVKKS LGEHGDKLDA GEKTAIESAV KDLEEALKGE DKDAIDAKTT ALMTASQKLG 
EKMYADAQAA GGPEAAAAAA AGAAGASAGA AAADDNVVDA EVKEVKKD