Gene Daci_5222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5222 
Symbol 
ID5750834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5788499 
End bp5788984 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content57% 
IMG OID641300347 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001566236 
Protein GI160900654 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.6071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCG TTGTCAACAA ACCCCTTCCC GAATTTGAAG CCAACGCTAC CGGCGGGATC 
AAGGTGACCA ACACCTCCCA CACGGGCCAG ATTCTGATCC TGTATTTCTA CCCAAAGGAC
AATACGCCTG GCTGCACCAC TGAAGCCATG CAGTTCCGCG ACAAGTACAA GGACTTCGTG
AAAGCTGGTG CCACCGTGTT TGGCGTCTCG CGCGACAACA TGAAGTCGCA CGACGACTTC
AAGGAAAAGC TGGAACTGCC GTTCGAGCTC ATCGCCGATA CGGAAGAGAA GATGTGCCAC
ATGTTCGGCG TGGTCAAGAA CAAGATCATG TACGGCAAGA AGGTGAAGGG CATCGAGCGC
TCCACTTTCC TGGTGGGCGC CGATGGCCTG CTGGTGCAGG AATGGCGCGG CCTGAAGGTC
CCCGGCCACG TTGACGAGGT GCTCAAGGCT GTCAAGACCC TGAAGGCACT GAAGCAGGCC
GCCTGA
 
Protein sequence
MAIVVNKPLP EFEANATGGI KVTNTSHTGQ ILILYFYPKD NTPGCTTEAM QFRDKYKDFV 
KAGATVFGVS RDNMKSHDDF KEKLELPFEL IADTEEKMCH MFGVVKNKIM YGKKVKGIER
STFLVGADGL LVQEWRGLKV PGHVDEVLKA VKTLKALKQA A