Gene Daci_5203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5203 
Symbol 
ID5750815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5770016 
End bp5771227 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content70% 
IMG OID641300328 
Productmethyltransferase small 
Protein accessionYP_001566217 
Protein GI160900635 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCTCTT CCCAGAACTG GTCCCTGCTG CAGTGGCAGG AGCACGAGGC CACCCAGGTT 
GCCCTGTGGC GCGCGGACAG CACCATGACC GCACCGCGCC GCATCGTCAT CGCTGATGAC
AGCCTGGCCG CCGACAGCGC CTACCGCCTG GCCTGCGAAG GCCAGGCCAT GCTGTGGCGC
GGCGATTTCC AGAATGCCCG GCAGTTGCTG TCGGCCCTGG GCCGCCGCCT CGACAAGCCC
GCACGTGAGA CTTCCGCCAA GGCGCGCCAG CGCCGCGCCG GCAAGGAAGA CGCCAAGCCG
GTCTTTCCCC ACGCCTTCCA CCTGCACCGC CAGGCACTGG CGCAGCGTGC GCGCATCCTG
TCCAGCGTGA TGATCGAGCT CGATACCCGC TGGCACTGCG CCCTGCGCCG CGCACCGGAC
TGGAGCGAAG CCTGTCGCGA AGCCTGGGGC GAGATTCCCG CCGACCAGGG TGCGCACAGC
GTGATCGTTC CCCTGCGTGA ACTGCTGGGT GCCCTGGGCG CACATGAGTG GCGCAAGAAG
GGCGTGGCCC TGGCCGTGCC GGGCATGCCG GAGTTCAGCA TTCACCCGCA CTACGGCGTG
TTCTCCCCGG TGCGCGGCGA GTACCTGGAT CTGGTGGCGC AGGCGCCCCT GCCGGCCGCA
GCCCAGCAGG CTGATGCCGC CGTCTGGGAT ATCGGCACGG GCACGGGTGT GCTTTCCGCT
CTCTTGCTGC ACCGTGGCGT GCGGCAGGTG GTGGCCACCG ACCTGAGCGA CCGGGCACTG
GCCTGCGCGC AGGACAACCT TCAGCGGCTG GGTCTGGCGC AGCGCGTGAG CCTGCGCAAG
GCGGACCTGT TCCCTGAAGG CCGGGCCGCC TTGGTGGTCT GCAATCCACC GTGGCTGCCG
GGCAAGGCCA GCTCCTTGCT GGAGCAGGCC GTCTATGACG AAGGCAGCCG CATGCTGCGC
GGTTTTGTCG AGGGCCTTGC TGCACATCTG CTGCCGGGCG GCGAAGGCTG GCTGATTCTG
TCGGATCTGG CCGAGCACCT GCAGTTGCGC TCGCGCGAGG AACTGCTGGG CTGGATCAAT
GCCGCAGGCC TGCAGGTCCT GGGCCGCGAG GACATCCGCC CGCGCCATGG AAAGGCTGCG
GACTCCACCG ATCCGCTGCA CGCGGCACGC GCCGCCGAGC TCACCTCGCT GTGGCGGCTG
GCGCCGCGCT GA
 
Protein sequence
MSSSQNWSLL QWQEHEATQV ALWRADSTMT APRRIVIADD SLAADSAYRL ACEGQAMLWR 
GDFQNARQLL SALGRRLDKP ARETSAKARQ RRAGKEDAKP VFPHAFHLHR QALAQRARIL
SSVMIELDTR WHCALRRAPD WSEACREAWG EIPADQGAHS VIVPLRELLG ALGAHEWRKK
GVALAVPGMP EFSIHPHYGV FSPVRGEYLD LVAQAPLPAA AQQADAAVWD IGTGTGVLSA
LLLHRGVRQV VATDLSDRAL ACAQDNLQRL GLAQRVSLRK ADLFPEGRAA LVVCNPPWLP
GKASSLLEQA VYDEGSRMLR GFVEGLAAHL LPGGEGWLIL SDLAEHLQLR SREELLGWIN
AAGLQVLGRE DIRPRHGKAA DSTDPLHAAR AAELTSLWRL APR