| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5200 |
|---|
| Symbol | |
|---|
| ID | 5750812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 5766414 |
|---|
| End bp | 5768228 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641300325 |
|---|
| Product | phospholipase D/transphosphatidylase |
|---|
| Protein accession | YP_001566214 |
|---|
| Protein GI | 160900632 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGCG CTCGCAACTT ACAGCCCCTT CCATTCACCA GCCTGTTTCG AGGCCTGCGG
ACCACGCTTG TCCTGCTGGT GTCCGCCGTG GTCTGCGGCT GCGCAAGCAG CTTGCCCTCC
CAGGTCGATC GCCCCGTCAC TGCAGCCTTG GAAGCCCCGC AAAGCACGCC ATTGGGGTCT
TTGGTTCAGC AATTGCGGCC TGCCAGCGTC AAGCCTCAAA CCTCCGCCTT CACCCTCCTG
TCCGGCGCCC AGGCCGCCTA TGGCGCCCGG CTGGCCCTGG TCGAGGGAGC GCAGCAGACG
CTGGACCTGC AGTACTACGC CATCCATGCC GACGAGAGCA CGCAGCGCCT GCTGCGCGGC
GTGGTCGAGG CAGCACGGCG TGGCGTGCGC GTGCGCGTGC TGCTGGACGA TTTCCACAGC
ACGGGCGCGA ATGCGCAGGT CATGCGCCTG GCCTTTGTGC CGGGTATCGA GATGCGCATG
TTCAATCCCC TGGCGGGCGC GCGCAGCTCG GCGCTGGGCC GGGCCTATAC GCTGCTGACG
GATTTCCAGC GGGCCCAGCA GCGCATGCAC AACAAGCTGT TCATCGCCGA CAACGCCATG
GGCGTGATCG GAGGGCGCAA TCTGGGCGAT GCGTATTTCG ATGCGGACAG CGCCAGCAAT
TTCGTGGACC TCGACGTGCT GGCGGCGGGA CCGGTGGTCA ACGACCTGTC GCGCAGCTTC
GACAGCTACT GGAACAACCA GCGCGCCTAT CCCGTCCAGT CGCTGATCAG CCTCAAGGAA
CTCAAGCAGT TGCGCGAGCG CTTTGCGGGC GATGATGACC AGACGCAGGA GGACGACCCC
ACACCTGCCG TTCCCGCAAA GGAGACAAAG GCAGATGACC AGACGGCTGA ACAGCGCCGG
ATCATCTGGG ACCAGCAGCC CATGGATTTG CGAAAGGCTC GCTGGACCTG GGCATCGGCC
GCCGTGCTGG TGGATGAACC CGCCAAGATT CCGCTGGACA GGGATGACGG CCCAGGCCCC
ATCACAAGCG CTGGCACGGA TGCGTCTGCA CAGGCCAGCC CCGCGTCGAA CGGCCCGCAG
GCCAGGCCTG CCGGCACGCT GCCCATGGGC CAGCCGGCTG GCGCCCTGCG CCAGGCGGCG
CGTCCGGTGC TGGAGGCCGA TTCGGTGGTC GATGGCCTGC TGGCCCTGGT GCGCAAGACC
CGGCGCGATC TGCTGGTGGT CTCGCCCTAT TTCGTGCCGG GCCCGGACAT GATGGAGGCG
TTTCGTGGCG CACGGCAACG CGGAGTGCGC GTGCGCATCC TGACCAATTC GCTGGCCTCC
AACGATGCAC CTTTGGCCCA TGCCGGCTAT GCGCGCCACC GCAAGGCGCT GCTGGAGATG
GGCGTTGAAC TCTACGAAAT GCGCAGCACG GCGGCCAGCG TCCGCTCTGC ATTCGGCTCG
GGCAGCACGG GTGGCGGCGG TCCTTCGGGT TCCACAGGCG CATCGCGTGC AATGCTGCAC
TCCAAGCTGT TGGTGGTGGA CGGGCATCTG GTGGCAGTCG GCTCGATGAA CCTGGATCTG
CGCTCGCAGT TGCAGAACAC CGAGATTGCC CTGCTCATCG CCAGCCGCGA GTTCGGCCGC
CTGGCCACGC AAAGCATCGA CGAGGGCCTG CAGGATGGCA GCTGGCGCGT CGAGATCGAC
AAGGATGGCG AGCTGGTGTG GCGGGCCTCG GAAGACAGCG AGCGCAGTGA CGAGCACAGC
GAGCCCGATG CCAGCTGGGG CCTGCGCCTG ATGCTCAAGC TCATTGGTCC GCTGGCGCCC
GACCATCTGC TGTGA
|
|---|
| Protein sequence | MSGARNLQPL PFTSLFRGLR TTLVLLVSAV VCGCASSLPS QVDRPVTAAL EAPQSTPLGS
LVQQLRPASV KPQTSAFTLL SGAQAAYGAR LALVEGAQQT LDLQYYAIHA DESTQRLLRG
VVEAARRGVR VRVLLDDFHS TGANAQVMRL AFVPGIEMRM FNPLAGARSS ALGRAYTLLT
DFQRAQQRMH NKLFIADNAM GVIGGRNLGD AYFDADSASN FVDLDVLAAG PVVNDLSRSF
DSYWNNQRAY PVQSLISLKE LKQLRERFAG DDDQTQEDDP TPAVPAKETK ADDQTAEQRR
IIWDQQPMDL RKARWTWASA AVLVDEPAKI PLDRDDGPGP ITSAGTDASA QASPASNGPQ
ARPAGTLPMG QPAGALRQAA RPVLEADSVV DGLLALVRKT RRDLLVVSPY FVPGPDMMEA
FRGARQRGVR VRILTNSLAS NDAPLAHAGY ARHRKALLEM GVELYEMRST AASVRSAFGS
GSTGGGGPSG STGASRAMLH SKLLVVDGHL VAVGSMNLDL RSQLQNTEIA LLIASREFGR
LATQSIDEGL QDGSWRVEID KDGELVWRAS EDSERSDEHS EPDASWGLRL MLKLIGPLAP
DHLL
|
|---|
| |