| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5198 |
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| Symbol | |
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| ID | 5750810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5764710 |
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| End bp | 5765156 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641300323 |
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| Product | fimbrial protein pilin |
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| Protein accession | YP_001566212 |
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| Protein GI | 160900630 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATGC CTCGTTCTAC TAACACGATC ATCATGAAAA GAAAAAATCA GGGTTTCACT
CTCATCGAAT TGATGATCGT CGTGGCGGTT GTCGGAATTC TTGGAGCCAT TGCCATACCG
AGCTACTCCG AGTACATACG TCGCGGGCAC CGCGCGGAGG CCAGGGCAGG CCTTCTGCAG
GCGGCGCAAT GGCTTGAAAG GGCTTCCACG GCCACGGGGA CCTACCCCCT GACCGCAGCA
TTTCCCAGCG CGCTTGCCAC GGTGCCTTCC AATCGATACG ACATCTCACT GAACTCGACC
GATGGAAGAA CTTTCACGTT GACGGCAACC CCCAAGGGCG CCCAGACAGG CGACAAGTGC
GGCAACTACA CCTTGACGCA AAGCGGCTTG CGTGGGGCCA ACGGAGCCAC GACAGGCACC
ATCGTTACTG ACTGCTGGGG CAAGTGA
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| Protein sequence | MTMPRSTNTI IMKRKNQGFT LIELMIVVAV VGILGAIAIP SYSEYIRRGH RAEARAGLLQ
AAQWLERAST ATGTYPLTAA FPSALATVPS NRYDISLNST DGRTFTLTAT PKGAQTGDKC
GNYTLTQSGL RGANGATTGT IVTDCWGK
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