| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5197 |
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| Symbol | |
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| ID | 5750809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5761165 |
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| End bp | 5764713 |
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| Gene Length | 3549 bp |
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| Protein Length | 1182 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641300322 |
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| Product | FG-GAP repeat-containing protein |
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| Protein accession | YP_001566211 |
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| Protein GI | 160900629 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.578151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA AGCCCCCTAT CCCTCATCAG CTGTTCTCCC GCACCCTGCT GTCCTGTGCC
GCTGCGGCAG CCCTGCTTCC GCAAGGCGCT TGGGCCCTGG ACCTGGCACA GTCGCCCCCC
GGCACCAAGG AGCCGTATGT GGCTCCCAAC GTCATCATTT CCATCGATGA TTCAGGGAGC
ATGAACTTTC GGCTCGATAT GGAAAGCGCC AGTGGCGCCA GCAGCCAGAC CGAGCCCAAT
TCGGATGGCA CCTGGCCGAT GACTAGCCGC CGTGTCAACG TCCTCAAGTA TGCACTCGTC
GGAAAGAACG GATCCGGCGG CATCTTCCGT GATACGACGC TGCTGCCCGA CAAGAAAATC
CGGCTGGCAT GGCAAGGCAT GTGGAACAAC GGCAACTCGT CCAATGCCGA CAATGTGGAC
AGTGCCCAGA TGAATACGAA CTCCATGCGC CCGCTGCAAA GCACGCATCG TGCGAACTTC
ATCTCCTTCA TCAGCAACCT GAATCCTGGC GGTGGCACTC CATCGCATCT GATGTTCAGC
CAGGCCGACA GCTACATGCG ACGCGGACTC AGCAAGAACA GCCCGTGGGC CAGCGATCCA
GGCAATACGG GAGCTCCCTA TCTTGCCTGC CGCCGCAATT ACCACATCAT GATGACCGAC
GGACGCTGGA ACGGAACCGC CACGGGTGTC CCCGATAGCA CTCGACGGGA CAATGCCACC
AACCTGACGC TCAGCGACAA CATGGTGTAC GGCGGCAGTG GCGCGGCCGA CCAGAAAAAG
TCCGCCCTTT ACCGCGACAC ATCCACGGGC ACCACCCTGG CCGACTGGGC CTTCTATAGC
TGGGCCACCC CGATGCAGAC CACGGGATTG ACGGGCACCA TGCAGCCGAC CGCGGACTAC
CGCAAGGCTC CGTCCGTGGA AACATTCACC AACGACAGCG GCAGTTCCGT CACGCTGGAT
CGCTACTGGA ACCCCCGCTA CAACCCGGCC ACCTGGCCGC ACATGGTCAC CTACACCATT
GGCTTCAGCA AAATGGCGTT CGATTGGAGC TATCCATCCA TTACACGCCC GACGCAGATG
GTGCCATTCG GCTATGACGG CAGTTTTCCG GATCTGGCCA AGGGGAGCAC CACCTGGCCC
AATCTGACAG CCAGCACAGA GTCGCGCAAT GCTCTGGACC TCTGGCACGC TGCCCTGAAC
GGCCGCGGCC GTTTCTATGC GGTGGAGAAA GGGGAAGACC TGGAAAAGGC CTTCCGAGAA
ATCTTCGGTC AGATCAACAC GCAGACAGAC CCCGACCTGA CATCCACGGC CACCAGCGGC
TCCAATGCGT CGCGCAACGA CGTCGGCAAG TTCACCGGCG CCTATGAGCC GCAGAATTAC
TGGAAAGGCT TCGTCACGGC GGAAACCGTG CAGAAAGACG GCACGACCGT CTCGACCGCA
AGCTGGGGAG GAAAGAATAC GGCCGACAAG CTCGATGCCA TCTCAGATAT CAATACCCGC
CTCATTCTCA CATGGAGCAA CAAATGGGAC TCCAACAGAT ATAGGGGTGG CGTGCCATTC
AAGTGGGCCA CCGATGATTC CCTTCTCAGC AGTGCGCAAA AGGCATCACT CGGCCTGAAC
TCCAACGATG TCACCGCCAA GACGGGGACC AAAGGCGAGA ATATTCTCAA CTATGTCCGT
GGTGATCGGC GCTACGAGGG CTCTGAAACC AGCGGCTACA CGACGAGCAG CCCTTTTCGC
GAGCGCAAAA GCCGCCAGGG CGACATCATC AACTCTGTCG TCTGGTTTAC CGGAACGCCG
TCCAGCAACT ATGCCCTTCC GGGCTATCTG AGCTTCGTGA GCGGAAGCTC CCGTCCGGCC
GTGATCTATG TCGGAGGCAA CGATGGCATG CTGCATGGAT TCTCTGCCGT GGATGGCAGC
GAGAAGATTG CCTATGTCCC CAGAGGCGTC ATTCCCTCGT TGAAGTCTCT CGCCGACCCC
ACCTTCAACA CCAGCCATCG ATATTTTGTC GATGGTTCCC CGATGACCGG GGATGTCTAT
TTGAGCTCCG GATCGAACTC CTTCTGGCGA ACCTTGCTGG TAGGTACTCT GGGAGCCGGC
GGCAAAGGCT ATTTTGTACT GGACGTGACC AATCCAGACA GCGCAAATCT CAGTGGAGGA
ACACCCGGAT TTTCCGAGGC GAATGCCCAG GCGCTCGTCA AGCTGGACCG GACCCGGGAT
GCGTCGGAAA CGCCGACATG CCCCTTGACA GGCATCAGTG CGGCCGAGCT TGCGGCATGC
ACCCAGGAAG TGGCTGAAGA CAGGGACATC GGGCATATCA CCGCACGCCC CGTGCTGGAT
GAGAATGACC CCATGCGCAC CACGCAGATC ACCACCATGA ACGATGGGCG CTGGGCCGTG
GTGATGGGCA ACGGATACAA CAGCGCCAGC CAGCGGCCGG TGCTGTTGAT CCAGTACCTG
GACGGTAACC AGGAACTGCT GCGCATCCCG GTCACGGCCG ATGTCCCCGG AACGGGATTG
GCTGCAGACA ATGGGCTTTC CGCCCCCCGC TTGGTCGACA TCAATGGAGA TGGCCGCCCA
GACGTGGCCT ATGCAGGAGA CAACCTCGGC AATCTCTGGA AGTTCGATAT CACGAGCGCT
CGCCCAAGCA AGTGGCAGGT GGCGCTGGGT GGTCAGCCTC TTTTCACGGC AAGAGGACCG
ACCGCACTGA ATTCCTCTCT GCGCACGAAT GTTCAGCCCA TCACGGTTGC ACCAACTGTG
CAGGCCAATG ATCGCACCAT GAAGGGTTCA GGCAAGGACG TAAAAATCGT TCGCGTAGGA
GGAATGATGG TAGCTTTCGG AACGGGGCGT AACGTCACGA AGGACGATCC CAACAATGTC
CAGGTACAAA CCCTGTATTC TGTGCTTGAC GAAACCCGCT ACCGGTTCAC AGACGACACC
AGGACGCTGA TCGAAGTCCA CCCAGGCGAT GCTTCCTGCA GCCGGGGCGG AGATTGCATA
CCCACGCCAA AGGCATGGGG CGTCGGGGTG ACAGCCGCCA AGCTGGCCAA GCAGACCATC
ACCGAACTCG GCAATGGTGA TTTCGCCACC GTCGATTCTG TTGACAAGCT GGGCGTTACC
ACATGGGGCG ACTTCAATGG CTGGTATATG GATATGCCTG CCATCGGAGA GCGGCTCCTC
AAGCCCATGG AGTTCTACGA TGGCAGCAAT ATTCTGGTCA TGTATTCCCA AGTACCCGCC
AAGGGATCGA ATGTGGATGT CAGCGTGGAA AGCTGCGAAT CCACGTCCGT AGATGAAGAG
CGTCAATACC GCACCATGAT CAATATCATG GATGGCCTTC GCCCCACGGT ACAGTTGGTG
GACATGAACA AGGATGGAAA ATACAACAGC GATGATTCAG GTGTATCGCG AGCCCGGGTC
AGCAAGGGAT CGCACAACCT GATCACACAG AAAAAGAATA TTCTGGATAT CGACGCCAAG
AACAACAAAG AACCTCTGGC TCCAATGCCA GAAGAGTCCT TGCGCCCCAG CTGGCGCCAA
GTCAAATGA
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| Protein sequence | MKRKPPIPHQ LFSRTLLSCA AAAALLPQGA WALDLAQSPP GTKEPYVAPN VIISIDDSGS
MNFRLDMESA SGASSQTEPN SDGTWPMTSR RVNVLKYALV GKNGSGGIFR DTTLLPDKKI
RLAWQGMWNN GNSSNADNVD SAQMNTNSMR PLQSTHRANF ISFISNLNPG GGTPSHLMFS
QADSYMRRGL SKNSPWASDP GNTGAPYLAC RRNYHIMMTD GRWNGTATGV PDSTRRDNAT
NLTLSDNMVY GGSGAADQKK SALYRDTSTG TTLADWAFYS WATPMQTTGL TGTMQPTADY
RKAPSVETFT NDSGSSVTLD RYWNPRYNPA TWPHMVTYTI GFSKMAFDWS YPSITRPTQM
VPFGYDGSFP DLAKGSTTWP NLTASTESRN ALDLWHAALN GRGRFYAVEK GEDLEKAFRE
IFGQINTQTD PDLTSTATSG SNASRNDVGK FTGAYEPQNY WKGFVTAETV QKDGTTVSTA
SWGGKNTADK LDAISDINTR LILTWSNKWD SNRYRGGVPF KWATDDSLLS SAQKASLGLN
SNDVTAKTGT KGENILNYVR GDRRYEGSET SGYTTSSPFR ERKSRQGDII NSVVWFTGTP
SSNYALPGYL SFVSGSSRPA VIYVGGNDGM LHGFSAVDGS EKIAYVPRGV IPSLKSLADP
TFNTSHRYFV DGSPMTGDVY LSSGSNSFWR TLLVGTLGAG GKGYFVLDVT NPDSANLSGG
TPGFSEANAQ ALVKLDRTRD ASETPTCPLT GISAAELAAC TQEVAEDRDI GHITARPVLD
ENDPMRTTQI TTMNDGRWAV VMGNGYNSAS QRPVLLIQYL DGNQELLRIP VTADVPGTGL
AADNGLSAPR LVDINGDGRP DVAYAGDNLG NLWKFDITSA RPSKWQVALG GQPLFTARGP
TALNSSLRTN VQPITVAPTV QANDRTMKGS GKDVKIVRVG GMMVAFGTGR NVTKDDPNNV
QVQTLYSVLD ETRYRFTDDT RTLIEVHPGD ASCSRGGDCI PTPKAWGVGV TAAKLAKQTI
TELGNGDFAT VDSVDKLGVT TWGDFNGWYM DMPAIGERLL KPMEFYDGSN ILVMYSQVPA
KGSNVDVSVE SCESTSVDEE RQYRTMINIM DGLRPTVQLV DMNKDGKYNS DDSGVSRARV
SKGSHNLITQ KKNILDIDAK NNKEPLAPMP EESLRPSWRQ VK
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