| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5193 |
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| Symbol | |
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| ID | 5750805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5758127 |
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| End bp | 5758693 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641300318 |
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| Product | N-terminal methylation site-containing protein |
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| Protein accession | YP_001566207 |
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| Protein GI | 160900625 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.17462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACGCAT TGCACCTACA ACGGCTGACA CACGCCAAGG CACCCGCCCG ACGCCGCAAA
GGGTTCACCA CCCTTGAGCT GATGGTGGTG GTCGCCATCC TGGCCATACT CACCGCCCTT
GCAGCGCCCA GCTTCACCCC ATTGATGGAG CGCTGGCGCG TGCGACAGGT TGCCGAGGAT
CTCCAGGCAA CGATTTATTT TGCCCGCTCC GAGGCCCTCA AGCGCGGCGG CAACGTCACT
ATCGCCAAGG CCGCAAATGG CAATGGCTGC GCCAATGCCA CCGGAAACAC CCAGTGGGGG
TGTGGCTGGC AAGTGGCCAG CGGCAACACG GTGCTGCAGC AGACTGCGCC CCCGAGCCGC
GTCCAGATCA CCCTCGCCGA CAGCACGGGC TCCATTGCCG TGGACCGCTG GGGCATGCTG
TCGCATGGAG GAGTTACCGC GGCAGCGGCC ATGGATCTCC TGCTCGTTCC CGAAGGCAAG
ATCGCCAGCG ACCGAAGCGC CGTCCGTCTT TGCACAGGCA CGGGCGGAAG GATCGTGCAG
ATGAAGGGCA GCGAATCCTG CTCCTGA
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| Protein sequence | MHALHLQRLT HAKAPARRRK GFTTLELMVV VAILAILTAL AAPSFTPLME RWRVRQVAED
LQATIYFARS EALKRGGNVT IAKAANGNGC ANATGNTQWG CGWQVASGNT VLQQTAPPSR
VQITLADSTG SIAVDRWGML SHGGVTAAAA MDLLLVPEGK IASDRSAVRL CTGTGGRIVQ
MKGSESCS
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