| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5189 |
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| Symbol | |
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| ID | 5750801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5753534 |
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| End bp | 5754409 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641300314 |
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| Product | hypothetical protein |
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| Protein accession | YP_001566203 |
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| Protein GI | 160900621 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.448312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACA CCCGCATCGC CGACGCAACC CTGGTGCAGC CTGGTCAACG CGGCCTGAGT
CTGGTCGAAC TGCTGGTGGG CCTTCTCCTG GGACTGTTGA TCATCGCAGT GGCCCTGGGC
GCACTCATGG CATCACGCGC CGTCTCCGGC ACCGTCAGCG ATGCCAGCCA TCTGCAGCAG
CAGGCATCCC ATCTCTTCCG CGTCATGGGC CGGCAGATCC GGCAGGCGGG GTCTCTTCGG
CTGCTTCTCT CGTCTGCAAA AAAGGGAACA GACACCGTTG ACGTGGCGGA CCCCGTTGCA
TTCGAGGCGA GCGCACAAGA TTTCGACCCT GCGCGCGACA CCATCCTGGG CCTTGATGCG
CCAGGCCGCG CTCAATACAA GCTCACCGTG GGCTACAGCA ACTACACGCA ACCGCTGCAC
GGCTCGGCCA TCGAAACTTC ACTGCAGCGC AATTGCCTGG GCCAGGCCAA CAGCCACAAC
CTGATCCTGA GCCGCTTTGC GCTGGACGCC CGCAAAAACA CCCTGCGCTG CACCGGAACA
CCCTCTGCGG GAGCCCAGCC ACTGGCCCAG AACGTCGCCA ACTTCCAGGT GCGCTATCTG
ATCCAGTTGC CGAAAGGTGA TGCACGCCTG CAGTACGTCA ACGCAGCCGC CGTGGGCCAG
GACTGGTCAC GCGTAGTTGC TGCGGAGGTC TGTCTGGTGC TTTTCGGGAT CGAAGTCATC
AACATGCCCG CCGACAGCCG CTACACCGAT TGCGCAAGCA GTGACGGCAC AGCTGAATCC
ATCGACATGA TCACGCTGCC GGCGCCCAGG ACCCGGCGCC TGCACATGGT CTTTCGCAGC
GTGTACCAGT TGCGCAGCCA GGGGATGGCT GGATGA
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| Protein sequence | MKHTRIADAT LVQPGQRGLS LVELLVGLLL GLLIIAVALG ALMASRAVSG TVSDASHLQQ
QASHLFRVMG RQIRQAGSLR LLLSSAKKGT DTVDVADPVA FEASAQDFDP ARDTILGLDA
PGRAQYKLTV GYSNYTQPLH GSAIETSLQR NCLGQANSHN LILSRFALDA RKNTLRCTGT
PSAGAQPLAQ NVANFQVRYL IQLPKGDARL QYVNAAAVGQ DWSRVVAAEV CLVLFGIEVI
NMPADSRYTD CASSDGTAES IDMITLPAPR TRRLHMVFRS VYQLRSQGMA G
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