| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5188 |
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| Symbol | |
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| ID | 5750800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5752917 |
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| End bp | 5753537 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641300313 |
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| Product | type IV pilus modification protein PilV |
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| Protein accession | YP_001566202 |
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| Protein GI | 160900620 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGA CAAGCACCCA CGCTCGGCAC GCCAAAGGCT TCACCCTGAT CGAAACCCTG
GTTGCCACCG TCGTCACGGC CCTGGGTGTT CTGGGAATCC TGAGCCTGCA GATGCGCACC
CTGGCCGACA CCCAAAGCGG CGTGCGCCGC GCTCAGGCCA TCCGGTTGAT CGAAGACTTC
AGCGAGCGCA CCCACGCCAA CCCCAATTCT CTCGGGCAGA TGAGCAACTA CGAATCCGAT
TGGGATCACA CCCCTGAATC CACCGCCGAC TGCAGCGCCA CACCATGCGA CCCGGAAACG
CTGGCCAGCT ACAACCTCGC GCTGTGGAAG GCTTCCGTTC ATCAACTGCT GCCAAGCGGA
GCCGCCAAGG TCTTCCCTGC AACAGACGAC ACCAGCAACG GACGCCACCT GGGCATCGTG
ATCAGCTGGC GTGAAAACGA GAAATCCAGC AAAGCCGGCG ACAAAAAACC CCTCGGACTC
CATAGCGATG GCACACACGG CGACGAAGCC ATGGCCTGCC CCACCGGCAG AGCCTGCCAC
CTGCAATACA TAGCGCTCAG CGCTCGTTGC GCGCCATATC TTGCCAACAA CGCAGTCCAG
TTCTTCTGCG CAAGCCCATG A
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| Protein sequence | MRLTSTHARH AKGFTLIETL VATVVTALGV LGILSLQMRT LADTQSGVRR AQAIRLIEDF
SERTHANPNS LGQMSNYESD WDHTPESTAD CSATPCDPET LASYNLALWK ASVHQLLPSG
AAKVFPATDD TSNGRHLGIV ISWRENEKSS KAGDKKPLGL HSDGTHGDEA MACPTGRACH
LQYIALSARC APYLANNAVQ FFCASP
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