| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5187 |
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| Symbol | |
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| ID | 5750799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5752363 |
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| End bp | 5752926 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641300312 |
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| Product | putative type-4 fimbrial pilin related signal peptide protein |
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| Protein accession | YP_001566201 |
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| Protein GI | 160900619 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCGA CCTGGTCTCA GGCCCACCCG GGCGCAAAAG GCTTCACGGC CATCGAGCTG
ATGGTGGTCG TCGCCATCCT CGCCGTGCTC ACCACGCTGG CAGCCCCCAG CTTCCACCTC
ATCATCGAGC GATGGCGCGT TCGCCAGACC GTGGAGGGCC TGCAGTCGAC GCTGCAATAC
GCGCGCTCCG AAGCCGTCCG GCGCGGGGGC GGCGTCTTCA TCCAGAAGCT ACCCCAAGGC
ACCAACGGCT GCACTCTGGC TGCACGTCAC GCGGATTGGG GCTGCGGCTG GGTGGTGTTC
GTTGACCGCA ATGGCAATAA GCGCTGGGAT CCCCGGGAAG AACTACAGCG CTTCGACACT
CCCGCACGCA CCCTTGTCAT CCGCTCCAGA TCCGCCGCCA TCATCAGTGT GGACCGATGG
GGACAAATGG GTGGATTCAC CGCCATGGGC TTCGCCGTCG CCCCGTCTTC CGCCGGCCTC
GTCTCTGCTG CAGCGAAAGG CATCTGCGTT TCGTCCGGCG GACGTATCCG GGTGGTCGGC
CGGGAGGGCA TTCCATGCGC CTGA
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| Protein sequence | MSSTWSQAHP GAKGFTAIEL MVVVAILAVL TTLAAPSFHL IIERWRVRQT VEGLQSTLQY
ARSEAVRRGG GVFIQKLPQG TNGCTLAARH ADWGCGWVVF VDRNGNKRWD PREELQRFDT
PARTLVIRSR SAAIISVDRW GQMGGFTAMG FAVAPSSAGL VSAAAKGICV SSGGRIRVVG
REGIPCA
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