| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5173 |
|---|
| Symbol | |
|---|
| ID | 5750784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 5738405 |
|---|
| End bp | 5739481 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641300297 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_001566187 |
|---|
| Protein GI | 160900605 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGACG CACTCAAGAC GGCCGGTGCC GGCCTGATCG CCGCACCCTG GTGGACCGAC
GTGGCCTGGC CCGTGCTCTG GATCCTGCTG GGCATCGTTG CCATCGTCGC CCCGCTGATG
GGCGCCGTGG CCTACCTGAC GCTGTGGGAA CGCAAGCTGC TGGGCTTCAT GCAGGTTCGC
ATGGGTCCCA ACCGCGTGGG TCCCTTCGGT CTGCTGCAGC CTCTGGCCGA CGGCCTGAAG
CTGTTGACCA AGGAACTGAT CCAGCCCACG GCTGCTGCCA AGGGCCTGTT CTACGTGGGC
CCGGTGATGG CCATCATGCC CGCCCTGGCG GCATGGGTGG CGATCCCCTT CGGTCCCGAC
GTGGCCCTGG CCAACGTCAA TGCCGGCCTG CTGCTGATCA TGGCCATCAC GTCCATCGAA
GTCTATGGCG TGATCATTGC GGGCTGGGCC TCCAACTCCA AGTACGCCTT CCTGGGCGCG
CTGCGCGCCT CGGCACAGAT GGTCAGCTAT GAAATCGCGC TGGGCTTCTG CTTCCTGGTG
GTGATCATGG TCACGGGCAG CATGAATCTG ACGCAGATCG TGCTGAGCCA GGGCCAGGGC
CAATTCGCCA GCATGGGTGC CAGCGTCCTG TCGTGGAACT GGCTGCCGCT GCTGCCGATC
TTCGTGGTCT ACCTGATCTC GGCCGTGGCC GAGACCAACC GCCACCCCTT CGACGTGGTC
GAAGGCGAAG CCGAAATCGT GGCCGGCCAC ATGGTCGAGT ACTCGGGCAT GGGCTTTGCC
ATCTTCTTCC TGGCCGAATA CGCCAGCATG TGGCTGGTGT CCATCCTGGC CGTGGTGATG
TTCCTGGGCG GCTGGCTGCC TCCGTTCGAC TTCCTGTCGT TCATCCCCGG ATGGATCTGG
CTGGCGGCGA AGACTTTCCT GGTCGTGTCC ATGTTCATCT GGATCCGTGC CACCTTCCCG
CGCTTTCGCT ATGACCAGAT CATGCGTCTG GGCTGGAAGA TCTTCATTCC CGTCACCCTG
GTGTGGCTGG TCGTCGTGGG TGGCTGGATG CACTCGCCTT GGAACATCTG GAACTGA
|
|---|
| Protein sequence | MIDALKTAGA GLIAAPWWTD VAWPVLWILL GIVAIVAPLM GAVAYLTLWE RKLLGFMQVR
MGPNRVGPFG LLQPLADGLK LLTKELIQPT AAAKGLFYVG PVMAIMPALA AWVAIPFGPD
VALANVNAGL LLIMAITSIE VYGVIIAGWA SNSKYAFLGA LRASAQMVSY EIALGFCFLV
VIMVTGSMNL TQIVLSQGQG QFASMGASVL SWNWLPLLPI FVVYLISAVA ETNRHPFDVV
EGEAEIVAGH MVEYSGMGFA IFFLAEYASM WLVSILAVVM FLGGWLPPFD FLSFIPGWIW
LAAKTFLVVS MFIWIRATFP RFRYDQIMRL GWKIFIPVTL VWLVVVGGWM HSPWNIWN
|
|---|
| |