Gene Daci_5171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5171 
Symbol 
ID5750782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5737181 
End bp5737849 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content64% 
IMG OID641300295 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 6 
Protein accessionYP_001566185 
Protein GI160900603 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCA AAACTGGTTT CTTCTATCTG TTCTCGGTCG TGCTGCTGTT TGCAGCCTTC 
CGGGTCGTCA CGGCGCGCAA CCCCGTGCAT GCCGTGCTCA ACCTGATCCT GGCCTTCTCG
CAGGCTGCCG GCATCTGGCT TCTGCTCAAG GCCGAGTTCC TGGGCGTGAC CCTGGTGCTG
GTCTACCTGG GCGCCGTGAT GGTGCTGTTC CTGTTCGTGG TGATGATGCT GGACATCCGC
ATCGACGCCG TGCGCCAGGG GTTCTGGAAG CATTTCCCCT TCGCTGCCCT GATCGGCGCA
CTGATTGCCT TTGAAATGGG CATGGTGCTG ATGGGCGGCT TCAGCGGCGT CGAGGAGCCC
AAGGCCATTG CGGCCACGGT CAACGCTGCC GGCCAGACCG TGCAGTACTC CAACACCCAG
GCCCTGGGCA AGCTGCTGTA CACCGAATAC CTGTACCCCG TCGAGATCGC TGCCGTGATC
CTGCTGGTGG CCATGATTGC CGCCATCGCC CTGACCCTGC GCAAGCGCAA GGACAGCAAG
GCAGTGAACC CGGCCCAGCA GATCCGCGTG CGTGCAAAGG ATCGCCTCGA GCTGGTCAAG
GTGCCGGTCA CCCAGGCGCC GCAGGCACCG GCCGCCGAGG CAACCCCCGC CGTGGAGACA
AAAGCATGA
 
Protein sequence
MDAKTGFFYL FSVVLLFAAF RVVTARNPVH AVLNLILAFS QAAGIWLLLK AEFLGVTLVL 
VYLGAVMVLF LFVVMMLDIR IDAVRQGFWK HFPFAALIGA LIAFEMGMVL MGGFSGVEEP
KAIAATVNAA GQTVQYSNTQ ALGKLLYTEY LYPVEIAAVI LLVAMIAAIA LTLRKRKDSK
AVNPAQQIRV RAKDRLELVK VPVTQAPQAP AAEATPAVET KA