Gene Daci_5168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5168 
Symbol 
ID5750779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5733315 
End bp5734790 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content63% 
IMG OID641300292 
Productproton-translocating NADH-quinone oxidoreductase, chain M 
Protein accessionYP_001566182 
Protein GI160900600 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTGGT TGAGTCTTTC AATCTGGGTG CCGATCGCAT TCGGCGCCCT CCTGCTGGCC 
CTGGGCCGCG AGGACCAGGT CAAGGCAGTG CGCTGGCTGG CCCTGGTCGG CGCCCTGGCC
GGCCTGGCGG TCACGCTGCC GCTGATCCAG CAGTTCGACA ACAGCACGGC TGCGATGCAG
TTCGTGGAGA AGGCGCTGTG GATCGAGCGC TTCAACATCT ACTACCACCT GGGCGTGGAT
GGCATCTCGT TCTGGTTCGT GCCGCTGACG GCCTTCATCA CCGTGATCGT CGTGATCGCG
TCGTGGGAAA ACATCACCGA GCGCGTGAAC CAGTACATGG GCGCGTTCCT GATCCTGTCC
GGCCTGATGG TCGGCGTGTT CAGCGCACTG GACGGCCTGC TGTTCTACGT GTTCTTCGAA
GCCACGCTGA TCCCGATGTA CCTGATCATC GGTATCTGGG GCGGCCCCAA CCGCATCTAC
GCGGCCTTCA AGTTCTTCCT GTACACGCTG ATGGGTTCGC TGCTGACCCT GATCGCGATC
ATCTACCTGT ACACCCAGTC CGGTGGCAGC TTCGAGATCC TCGACTGGCA CAAGCTGCCG
CTGTCCATGA CGGCCCAGAC GCTGATCTTC TTCGCCTTCT TCGCGGCCTT CGCCGTGAAG
GTGCCGATGT GGCCGGTGCA CACCTGGCTG CCCGACGTGC ACGTGGAAGC GCCCACCGGC
GGCTCCGCCG TGCTGGCCGC CATCATGCTG AAGCTCGGTG CCTACGGTTT CCTGCGCTTT
TCCATGCCCA TCGCCCCTGA TGCATCGCAC AAGTGGGCCT GGCTGGTCAT CGCGCTGTCG
CTGGTCGCCG TGATCTACGT GGGCGTGGTC GCCCTGGTGC AAAAGGACAT GAAGAAGCTG
GTGGCCTACT CGTCCGTGGC CCACATGGGC TTCGTGACCC TGGGCTTCTT CATCTTCAAC
CCGCTGGGCG TTGCCGGGGG CATCGTGCAG ATGATTGCCC ACGGCTTCGT GTCGGGCGCC
ATGTTCCTGT GCATCGGCGT GCTCTACGAC CGCGTGCACT CGCGTGAAAT CGCCTCCTAC
GGCGGCGTGG TCAACACCAT GCCCAAGTTC GCGGCCTTCG CACTGCTGTT CGCCATGGCC
AACTGCGGCC TGCCCGCAAC GGCCGGCTTC GTGGGCGAGT GGATGGTGAT CCTGGGTGCC
GTCCAGTACA ACTTCTGGAT TGGCCTGGGC GCTGCCACTG CGCTGATCTT CGGCGCCGCC
TACACCCTGT GGATGTACAA GCGCGTCTAC CTGGGTCCGG TCACCAACGA CAATGTGCGC
GGCCTGACCG ACATCGGCAA CCGCGAGTTC CTGGTGCTGG GTCTGCTGGC CATCGCCGTG
CTGTACATGG GTCTGTATCC CAAGCCCTTC ACTGACGTGA TGGATGTGTC CGTGGCCGAG
CTGCTCAAGC ATGTGGCCAT GAGCAAGCTG CAGTGA
 
Protein sequence
MHWLSLSIWV PIAFGALLLA LGREDQVKAV RWLALVGALA GLAVTLPLIQ QFDNSTAAMQ 
FVEKALWIER FNIYYHLGVD GISFWFVPLT AFITVIVVIA SWENITERVN QYMGAFLILS
GLMVGVFSAL DGLLFYVFFE ATLIPMYLII GIWGGPNRIY AAFKFFLYTL MGSLLTLIAI
IYLYTQSGGS FEILDWHKLP LSMTAQTLIF FAFFAAFAVK VPMWPVHTWL PDVHVEAPTG
GSAVLAAIML KLGAYGFLRF SMPIAPDASH KWAWLVIALS LVAVIYVGVV ALVQKDMKKL
VAYSSVAHMG FVTLGFFIFN PLGVAGGIVQ MIAHGFVSGA MFLCIGVLYD RVHSREIASY
GGVVNTMPKF AAFALLFAMA NCGLPATAGF VGEWMVILGA VQYNFWIGLG AATALIFGAA
YTLWMYKRVY LGPVTNDNVR GLTDIGNREF LVLGLLAIAV LYMGLYPKPF TDVMDVSVAE
LLKHVAMSKL Q