Gene Daci_5167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5167 
Symbol 
ID5750778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5731797 
End bp5733290 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content65% 
IMG OID641300291 
ProductNADH dehydrogenase subunit N 
Protein accessionYP_001566181 
Protein GI160900599 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGACA ACATCAGCTG GCTGGCCATC TATCCGGAGA TCCTTCTCCT GGTCATGGCC 
TGCGTGATCG CCCTGGTGGA CCTGGGCGTC AAAAGCCCGC GCCGCACGGG CACCTATGTT
CTGACGCTGC TGACCCTGGG CGTGGTGGCC GTGCTGCAAG GCATGTACGC CTCCAGTGGC
AACACCTTCT ATGGCTGGGG CAACATGGTT GTCTCCGACG CCATGGGCAA CTGGCTCAAG
TGCTTCGCCA CCGTGGCCAT GATGGTCACC CTGGTCTATG GCCGCCCCTA CGCCGCCGAC
CGCGACATGC TGCGCGGCGG CGAGCTGTTC ACGCTGGCCA TGCTCGCGCT GCTGGGCATG
TTCATCATGA TCTCGGGCAA CAACTTCCTG GTCATCTACC TGGGCCTGGA GCTGCTGACG
CTGTCCAGCT ACGCCCTGGT GGCCCTGCGC CGCGACCACA CGGCGTCGGT CGAGGCCGCG
ATGAAGTACT TCGTGCTCGG CGCCATGGCC AGCGGCTTCC TGCTGTACGG CATGTCCATG
CTCTACGGTG CGACCGGCTC GCTGGACATC GGCCAGGTCT TCAAGGCCAT CAACTCGGGC
GAGATCAAGC ACCAGGTGCT GGTGTTCGGC CTGGTCTTCG TGGTCTCCGG CCTGGCCTTC
AAGCTGGGCG TGGTTCCCTT CCACATGTGG GTGCCCGACG TCTACCAGGG CGCTCCCACG
GCCATCACCA CCATGATCGG TGGCGCGCCC AAGCTGGCCG CCTTCGCCAT CGTCATCCGC
CTGCTGGTGG ACGGCCTGCT GCCGCTGGCC ATCGACTGGC AGCAGATGCT GGCGGTGCTT
GCCATCGCCT CGCTGCTGGT GGGCAACCTG GCCGGCCTGC AGCAGACCAA CCTCAAGCGC
ATGCTGGCCT ACTCGACCAT CTCGCAGATG GGCTTCGTGC TGCTGGGCCT GATGTCGGGT
GTGGTGGATG GCAAGGTCGA TCCGGCCACC ATCGAGAACG CCTACAGCTC GGCCATGTTC
TACGTGGTGA CCTACGTGCT GACCACGCTG GCCGCCTTCG GCGTGATCCA GCTGCTGGCC
CGCGAAGGCT TCGAGAGCGA AGAGGTCGCC GACTTTGCCG GCCTCAACCA GCGCAGCCCG
CTGTATGCCG GCGTGATGGC GATCTGCCTG TTCTCCATGG CCGGTATCCC TCCCCTGGTG
GGCTTCTACG CCAAGCTGTC GGTGCTGCAG GCGCTCGTGG CATCGGGCCA CAGCCTGTAC
ATCGCGCTGG CCGTGTTTGC CGTGGTCATG TCGCTGATCG GCGCCTTCTA CTACCTGCGC
GTCGTCAAGG TCATGTACTT TGACGAACCC ATCACCGCCA CCAGCGTTTC CGCTTCGCTG
GACGTGCGCG TGGTGCTGAC CCTCAACGGC GCCCTGGTGC TGGGGCTGGG CCTTCTGCCG
GGTGGCCTGA TGGCCCTGTG CGCCGACGCC GTCGTGCGCG CCCTGGCTTC CTGA
 
Protein sequence
MIDNISWLAI YPEILLLVMA CVIALVDLGV KSPRRTGTYV LTLLTLGVVA VLQGMYASSG 
NTFYGWGNMV VSDAMGNWLK CFATVAMMVT LVYGRPYAAD RDMLRGGELF TLAMLALLGM
FIMISGNNFL VIYLGLELLT LSSYALVALR RDHTASVEAA MKYFVLGAMA SGFLLYGMSM
LYGATGSLDI GQVFKAINSG EIKHQVLVFG LVFVVSGLAF KLGVVPFHMW VPDVYQGAPT
AITTMIGGAP KLAAFAIVIR LLVDGLLPLA IDWQQMLAVL AIASLLVGNL AGLQQTNLKR
MLAYSTISQM GFVLLGLMSG VVDGKVDPAT IENAYSSAMF YVVTYVLTTL AAFGVIQLLA
REGFESEEVA DFAGLNQRSP LYAGVMAICL FSMAGIPPLV GFYAKLSVLQ ALVASGHSLY
IALAVFAVVM SLIGAFYYLR VVKVMYFDEP ITATSVSASL DVRVVLTLNG ALVLGLGLLP
GGLMALCADA VVRALAS