Gene Daci_5165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5165 
Symbol 
ID5750776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5730888 
End bp5731397 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content67% 
IMG OID641300289 
Producthypothetical protein 
Protein accessionYP_001566179 
Protein GI160900597 
COG category[S] Function unknown 
COG ID[COG5319] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.335034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTGC TCGACCTGCA TTGCCCGCAC GGCCATCTGT TCGAGGGCTG GTTCGCCTCG 
GAAGATGATT TCCAGGGCCA GCTGCAGCGC CAGCTGGTGC TGTGCCCCGT CTGCGGCCAC
AGCGACATCA CCAAGCGACT GAGCGCCCCC CGCATCAATC TTGGCGCCAA GCCAGCAGCC
ACGCCCCCGA CTGCGGCGGC TGAGCCTGCT GCAGCCGCCT CGGCTGCCAG TGCGGCAGCC
GTTCCCTCAC CGTCCATGCC GCCCCAGGCG CGCGAGCAGC TGCAGGCCAT GCAGGCCGCC
TGGCTGAAAT GGTCGCGCCA GGTGGCGCAG CAGACCGAGG ACGTGGGCGA GCGTTTTGTC
GATGAAGCCC GCCGCATGCA CTACGGCGAG ACGGACGAGC GTGCCATCCG CGGCAAGGCC
AGCCCCGAGC AGGCCATGCA ATTGCTGGAT GAAGGCATTG CCGTCCTTCC ATTGGCCTTG
CCCGAAGGCA GCAAGGAAAC GCTGCAGTAA
 
Protein sequence
MKVLDLHCPH GHLFEGWFAS EDDFQGQLQR QLVLCPVCGH SDITKRLSAP RINLGAKPAA 
TPPTAAAEPA AAASAASAAA VPSPSMPPQA REQLQAMQAA WLKWSRQVAQ QTEDVGERFV
DEARRMHYGE TDERAIRGKA SPEQAMQLLD EGIAVLPLAL PEGSKETLQ