Gene Daci_5164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5164 
Symbol 
ID5750775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5729504 
End bp5730274 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content63% 
IMG OID641300288 
ProductABC transporter related 
Protein accessionYP_001566178 
Protein GI160900596 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG TTATTCTCGA AACCCGGAAC CTGACCAAAG AGTTCAAGGG ATTTACGGCG 
GTGAGCAAGG TGGACCTTTC GGTACGCCGT GGCTCCATCC ATGCCTTGAT CGGCCCCAAT
GGCGCAGGCA AGACCACCTG CTTCAATCTG CTGACCAAGT TCCTGGAGCC CACCTCCGGC
ACCATCCGTT TCAATGGCGA GGACATCACG CGGGAAGCAC CGGCGCAGAT TGCGCGCCGT
GGCGTGATCC GGTCCTTCCA GATCTCGGCC GTGTTCCCGC ATTGCACGCT GCTGGAGAAC
GTGCGCATCG GCCTGCAGCG CAAGCTGGGC ACGGAGTTCC ATTTCTGGCG CAGCGAGAAG
AGCCTGTCGC AGCTCGATGA CCGCGCCATG CAGTTGCTGG CCGAAGTGGG CCTGCAGGAC
CTGGCCGACG AGGTCACGGT CAACCTGCCC TATGGCCGCA AGCGTGCGCT GGAGATTGCC
ACCACGCTGG CCATGGAGCC CGAGCTGATG CTGCTGGACG AACCCACGCA GGGCATGGGC
CACGAAGACG TGGACCGCGT GACCCAGCTG ATCAAGAAGG TCTCGGCCGG CCGCACGATT
CTCATGGTGG AGCACAACAT GAAGGTGATC TCCACCATTG CCGACCGCAT CACGGTGCTG
CAGCGCGGCG CCGTGCTGGC CGAGGGACCG TACGAGGAAG TTTCGCGCAA CCCGCAAGTG
ATGGAAGCGT ATATGGGCAC CACCGACGGC CAGTTGCAGG GAGCGCATTG A
 
Protein sequence
MSDVILETRN LTKEFKGFTA VSKVDLSVRR GSIHALIGPN GAGKTTCFNL LTKFLEPTSG 
TIRFNGEDIT REAPAQIARR GVIRSFQISA VFPHCTLLEN VRIGLQRKLG TEFHFWRSEK
SLSQLDDRAM QLLAEVGLQD LADEVTVNLP YGRKRALEIA TTLAMEPELM LLDEPTQGMG
HEDVDRVTQL IKKVSAGRTI LMVEHNMKVI STIADRITVL QRGAVLAEGP YEEVSRNPQV
MEAYMGTTDG QLQGAH