Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5163 |
Symbol | |
ID | 5750774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5728792 |
End bp | 5729502 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641300287 |
Product | ABC transporter related |
Protein accession | YP_001566177 |
Protein GI | 160900595 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.726387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCAC CGGCATTGGA AATCAAGGGC CTGCAGGCCT GGTACGGCGA ATCCCATGTG CTGCACGGCA TGGACCTGGT GGTCCAGCCC GGTGAGGTGG TCACGCTGCT GGGGCGCAAC GGCGCGGGCC GCACGTCCAC GCTGCGCGCC ATCATGGGTC TGACGGGCGC GCGCAAGGGC TCCATCCGGA TCAACGGCGT GGAGGCCATC CACCTGCCCA CGCACCGCAT TGCCCACCTG GGCGTGGGCT ACTGCCCTGA AGAGCGCGGC ATCTTCTCCA GCCTCTCGTG CGAAGAGAAC CTGATGCTGC CGCCGCCGCT CAAGACCGGC CAGCCGGGCA TGAGCGTGGA TGAGATCTAC GCCATGTTCC CCAACCTGGC CGAGCGCCGC CACAGTCAGG GCACGCGCCT GTCGGGCGGC GAGCAGCAGA TGCTTGCGGT GGCGCGCATC CTGCGCACGG GCGCGCGGCT GCTGCTGCTC GACGAAATCT CGGAAGGCCT GGCACCCGTC ATCGTGCAGG CGCTGGCCCG CATGATCACC ATGCTGCGCA CCAAGGGCTA CACCGTGGTG ATGGTGGAGC AGAACTTCCA CTTCGCGGCG CCGCTGGCCG ACCGCTTCTA CGTGGTTGAG CACGGCCATG TGGTCGAGCG TTTCGGCGCG TCCGAGCTGC AGGCCAAGAT GCCCGTGCTC AACGAGCTGC TCGGAGTCTG A
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Protein sequence | MTAPALEIKG LQAWYGESHV LHGMDLVVQP GEVVTLLGRN GAGRTSTLRA IMGLTGARKG SIRINGVEAI HLPTHRIAHL GVGYCPEERG IFSSLSCEEN LMLPPPLKTG QPGMSVDEIY AMFPNLAERR HSQGTRLSGG EQQMLAVARI LRTGARLLLL DEISEGLAPV IVQALARMIT MLRTKGYTVV MVEQNFHFAA PLADRFYVVE HGHVVERFGA SELQAKMPVL NELLGV
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