Gene Daci_5163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5163 
Symbol 
ID5750774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5728792 
End bp5729502 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content68% 
IMG OID641300287 
ProductABC transporter related 
Protein accessionYP_001566177 
Protein GI160900595 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.726387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAC CGGCATTGGA AATCAAGGGC CTGCAGGCCT GGTACGGCGA ATCCCATGTG 
CTGCACGGCA TGGACCTGGT GGTCCAGCCC GGTGAGGTGG TCACGCTGCT GGGGCGCAAC
GGCGCGGGCC GCACGTCCAC GCTGCGCGCC ATCATGGGTC TGACGGGCGC GCGCAAGGGC
TCCATCCGGA TCAACGGCGT GGAGGCCATC CACCTGCCCA CGCACCGCAT TGCCCACCTG
GGCGTGGGCT ACTGCCCTGA AGAGCGCGGC ATCTTCTCCA GCCTCTCGTG CGAAGAGAAC
CTGATGCTGC CGCCGCCGCT CAAGACCGGC CAGCCGGGCA TGAGCGTGGA TGAGATCTAC
GCCATGTTCC CCAACCTGGC CGAGCGCCGC CACAGTCAGG GCACGCGCCT GTCGGGCGGC
GAGCAGCAGA TGCTTGCGGT GGCGCGCATC CTGCGCACGG GCGCGCGGCT GCTGCTGCTC
GACGAAATCT CGGAAGGCCT GGCACCCGTC ATCGTGCAGG CGCTGGCCCG CATGATCACC
ATGCTGCGCA CCAAGGGCTA CACCGTGGTG ATGGTGGAGC AGAACTTCCA CTTCGCGGCG
CCGCTGGCCG ACCGCTTCTA CGTGGTTGAG CACGGCCATG TGGTCGAGCG TTTCGGCGCG
TCCGAGCTGC AGGCCAAGAT GCCCGTGCTC AACGAGCTGC TCGGAGTCTG A
 
Protein sequence
MTAPALEIKG LQAWYGESHV LHGMDLVVQP GEVVTLLGRN GAGRTSTLRA IMGLTGARKG 
SIRINGVEAI HLPTHRIAHL GVGYCPEERG IFSSLSCEEN LMLPPPLKTG QPGMSVDEIY
AMFPNLAERR HSQGTRLSGG EQQMLAVARI LRTGARLLLL DEISEGLAPV IVQALARMIT
MLRTKGYTVV MVEQNFHFAA PLADRFYVVE HGHVVERFGA SELQAKMPVL NELLGV