| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5162 |
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| Symbol | |
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| ID | 5750773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5727496 |
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| End bp | 5728692 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641300286 |
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| Product | putative substrate-binding periplasmic (pbp) ABC transporter protein |
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| Protein accession | YP_001566176 |
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| Protein GI | 160900594 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.15516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAA AACTGACCGC ACTGTCGTGC ATGCTGGCTG CGGCCGGCCT GGCCAGCCCG
CTTGCCATGG CACAGGAGAA GGTGAAGATC GGCTTCGTGA CCGACATGTC CAGCCTGTAT
GCGGACGTGG AAGGCAAGAA CGCCGTCACC GCCATGCAGA TGGCCATCGA TGACTTCGGC
GGCAAGGTGC TGGGCCAGCC CATCGAGCTG CTGAGCGCCG ACCACCAGAA CAAGGCCGAC
ATCGCCGCCT CCAAGGTGCG CGAGTGGGTG GACACGCAAG GTATCTCGCT GGTGTTCAGC
GGCACCAACT CCGGCACGGC CCTGGCGGTG TCGCAGGTGG CCAATGAGAA AAAGCGTGTG
CACTTCAACA GCGGCGCGGG TTCCTCGGCA CTGACCAACG AGCAGTGCAA CGCCTACACC
GTGCACTACG CCTATGACAC CGTTGCCCTG GCCAAGGGCA CGGGTACGGC CGTGGTCGAG
CGCGGCGGCA AGGACTGGTT CTTCCTGACG GCCGACTACG CCTTCGGCCA CGCGCTGGAG
AACGACACCA CGGCCGTGAT CAAGGCCAAG GGCGGCAAGG TGGTGGGCGG CGTCAAGCAC
CCGCTCAATG CCTCGGACTT CTCCTCCTTC CTGCTGCAGG CGCAGGCCTC CAAGGCCCAG
ATCCTGGGCC TGGCCAACGC CGGTGGCGAC ACCATCAACG CCATCAAGGC CGCCAAGGAA
TTCGGCATCA ACAAGAGCAT GAAGACCGTG GGCCTGCTGG TGTTCCTGAC CGACATCCAC
AGCCTGGGCC TGAAGAACAC CGAAGGCATG CAGTTCACCA CCAGCTGGTA CTGGGACCAG
AACGATGCCA CGCGCAAGTT CGGCGAGCGC TTCTTCGCCA AGACCAAGCG CATGCCCACC
TCCATCCAGG CTGCCGACTA CTCGGCCGTG ACCAGCTACC TCAAGGCCGT GCAGGCCGTG
AAGTCCACGG ATGCCGACAA GGTCATGGCG TACCTCAAGA GCACGCCCAT CGACGACTTC
TACGGCAAGG GCTCGATCCG TCCCGATGGC ACCTTCGCCC ATGACATGTA CCTGGTCGAG
GTCAAGAAGC CCGCCGAGTC CAAGAAGCCC TGGGACTACC TGAAGGTCGT GGCCACGCTG
CCCGCCGACC AGGTCTGGAC CACCAAGGCC GAGACCAAGT GCGCGCTGTG GAAGTAA
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| Protein sequence | MKAKLTALSC MLAAAGLASP LAMAQEKVKI GFVTDMSSLY ADVEGKNAVT AMQMAIDDFG
GKVLGQPIEL LSADHQNKAD IAASKVREWV DTQGISLVFS GTNSGTALAV SQVANEKKRV
HFNSGAGSSA LTNEQCNAYT VHYAYDTVAL AKGTGTAVVE RGGKDWFFLT ADYAFGHALE
NDTTAVIKAK GGKVVGGVKH PLNASDFSSF LLQAQASKAQ ILGLANAGGD TINAIKAAKE
FGINKSMKTV GLLVFLTDIH SLGLKNTEGM QFTTSWYWDQ NDATRKFGER FFAKTKRMPT
SIQAADYSAV TSYLKAVQAV KSTDADKVMA YLKSTPIDDF YGKGSIRPDG TFAHDMYLVE
VKKPAESKKP WDYLKVVATL PADQVWTTKA ETKCALWK
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