Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5155 |
Symbol | |
ID | 5750766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 5720046 |
End bp | 5722613 |
Gene Length | 2568 bp |
Protein Length | 855 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641300279 |
Product | hypothetical protein |
Protein accession | YP_001566169 |
Protein GI | 160900587 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.426312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCCC TGCTTCGCAC CTTTTCCTGG CAGGAGCTGC GCCAGCATCC CTGGCGCACG GCCACCGCCC TGGTGGCCAT CATGCTGGGC GTGGCCCTGG GCTTTGCCGT GCATGTGATC AACCAGTCCG CGCTCGATGA GTTCTCGCGC GCCGTGCGCA CGGTCAGCGG CCAGCCGGAC CTGGAGTTGC GTGCCATGCA GGGCGGCCTG CCCGAATCGC TGTATGGCCG TGTTGCGCAG CAGCCCCAGG TCAGCCTGGC CGCCCCCTGG ATCGAAGCCA CGGCCCTGGC CGGCACCGCC ACGCCGGTGC AGTTGCGCGT GCTGGGCGGC GATGCGCTGC GGCTGGCGCC CGTGGCGCCT GCGCTCATGC CCCGGCTGTT CGATGGCGGC GGGCGGCTGG ACCTGTTCGC GCCCGATGCG GTCTTCCTCA ATGCAACGGC ACTCGAAGCC CTGGGCCTGA CGCCGGAGCA GGCGCGGCAC ACGCTCCTGC CATGGCAACT GGGCGGGCGC GCGCAGACCC TGCGCATCGC GGGCACGGTG GCCGCATCCG GCCCGCCGCT GGCCGTGATG GACATCGGCG CGCTGCAGGA CAGCCTGCAG CGCTGGGGCC AGGTGGACCG CATTGATGTG CTGCTGGCCG AAGGCGCCAC GCGCGAGTCC CTGCTGGCCG AGCTGCGCCG CCTGCCCGAC TGGCCCGCCC AGGCCCTGGC CAGCCGCCCC GGCGACGACC AGCAGCGCAT TGCCGAGATG TCGCGCGCCT ACCGCGTCAA CCTCACGGTG CTGGCCCTGG TGGCGCTGTT CACGGGGGCG TTCCTGGTGT TCTCGGTGCT GGCGCTCAGC GTGGCCCAGC GCGCGCCGCA GTTCGCCCTG CTGGCCGTGC TGGGATTGAC GCCGCGCCAG CGCCTGGGCC TGGTGCTGCT GGAATCGCTG CTGCTGGGCA TGGTGGGCAG CGCGGCCGGC ATTGCGCTGG GCGCGGGCCT GGCCTGGCTG GCCCTGCACC TGCTGGGCGG TGACCTGGGC GGCGGCTACT TTGCCGGCGT GCAGCCTGCA CTGCAGTGGA GCGCCGGCGC CGCGCTGACC TTTGGCCTGC TGGGCGTGGC CGCCACCGTG GCTGGCGGCT GGTGGCCGGC GCGCCAGGCC ATGGAGTTGC CGCCCGCCGC CACGCTCAAG GGCCAGTGCG CCGGCTCTGA GCGCGCGGCG CGTGGCCTGC CGGCCCTGCT GCTGATGGCA GCCAGCGTGG CCCTGGCCTT TGTGCCGCCC GTGGCCGGCA TTCCCCTTGC CGCCTATGCC GCCGTGGCCC TGCTGCTGCT GGGCGGCATG GCCGCCCTGC CCTGGCTGTT GGGCCAGCTG TTGCGCCTGG TGCCGCAATC GCTGCTGCGC CAGCCGCTGG CCCTGCTGCC CGTGGAGCGT GCGCGGCGCA TGCGCCGCAG CACCACGGTG GCCGTGGGCG GCGTGGTGGC CAGCCTGAGC CTGGCCGTGG CGCTGACCGT GATGGTGGCC AGCTTCAGGG ACAGCATGAT CGCCTGGCTG GACGCCGTGC TGCCCGCCCC GCTGTACCTG CGCACCGCCG GCAGCGCAGG CCGTGCCGAT GCCGCGCCCC TGCCCGCCGA TCTGGCCGCG CGCATTGCCG CCCTGCCTGG CGTGCAGCGC GCCCAGCCCA TGCGCGGCAC CAGCCTGTGG CTCAGCCCGG ATCGCCCCGC CGTCAGCCTG CTGCTGCGTC CGCTGCATGG CCCCCAGGGC CAGCAGTTGC CGTGGATACA AGGCCCCGTG CAAGCACCCG CTGGCAGCAC GCCCGTCTAT GTCAGTGAAG CCGTGGCCCA ACTCTATGGC GTGCGGCCGG GCCAGGAGTG GCCGCTGCTG GCCCAGGCCC TGCCGTCCGG AAATTCCCGC GTGTTTGTGG CCGGCATCTG GCGCGACTAT GTGCGCCAGT TCGGCGCCAT CGCCATGGAC TGGGAGGACT ACCAACGGCT CGCCGACGGC AGCGCCACCA CGGCAGGCCC CACCGAAATC GCCATCTGGC CGGACGGCGA CGACACGGCC ACGGCGCAAC AGCTTCAGGC GCGCATCCAG TCGCTGCTGA CCGGGCCGGG CGCCGCGCAG GCACTGGAGT TCGCCAGCAG CGGCGCGCTG CGCGAGCGCT CCATGCGCAT CTTCGACCGC AGCTTTGCCG TGACCTACTG GCTGCAGGCC GTGGCCATCG GCATCGGCCT GTTCGGCATT GCCGCCAGCT TCAGCGCCCA GGTGCTGGCA CGGCGCAAGG AATTCGGCCT GCTCGCCCAC CTGGGCCTGA CGCGGCGCGA CATCCTGGCC GTGGTGGCCG GCGAGGGCAT GGCCTGGACC ACGGCGGGCG CCATCGCCGG CAGCCTGCTG GGCCTGGGCG TGGCGGTAAT CCTGGTGCAC GTGGTGAATC CGCAAAGCTT TCACTGGACC ATGGAGCTGT CCCTGCCGTG GCCCCGCCTT TTGGCGCTGG CTGCCAGCGT GATCGCAGCA GGCACGCTGA CGGCCTGGCT GGCCGGGCGT GCAGCTGCAG GGCGCGAGGC AGTGCTGGCG GTCAAGGAGG ATTGGTAA
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Protein sequence | MLALLRTFSW QELRQHPWRT ATALVAIMLG VALGFAVHVI NQSALDEFSR AVRTVSGQPD LELRAMQGGL PESLYGRVAQ QPQVSLAAPW IEATALAGTA TPVQLRVLGG DALRLAPVAP ALMPRLFDGG GRLDLFAPDA VFLNATALEA LGLTPEQARH TLLPWQLGGR AQTLRIAGTV AASGPPLAVM DIGALQDSLQ RWGQVDRIDV LLAEGATRES LLAELRRLPD WPAQALASRP GDDQQRIAEM SRAYRVNLTV LALVALFTGA FLVFSVLALS VAQRAPQFAL LAVLGLTPRQ RLGLVLLESL LLGMVGSAAG IALGAGLAWL ALHLLGGDLG GGYFAGVQPA LQWSAGAALT FGLLGVAATV AGGWWPARQA MELPPAATLK GQCAGSERAA RGLPALLLMA ASVALAFVPP VAGIPLAAYA AVALLLLGGM AALPWLLGQL LRLVPQSLLR QPLALLPVER ARRMRRSTTV AVGGVVASLS LAVALTVMVA SFRDSMIAWL DAVLPAPLYL RTAGSAGRAD AAPLPADLAA RIAALPGVQR AQPMRGTSLW LSPDRPAVSL LLRPLHGPQG QQLPWIQGPV QAPAGSTPVY VSEAVAQLYG VRPGQEWPLL AQALPSGNSR VFVAGIWRDY VRQFGAIAMD WEDYQRLADG SATTAGPTEI AIWPDGDDTA TAQQLQARIQ SLLTGPGAAQ ALEFASSGAL RERSMRIFDR SFAVTYWLQA VAIGIGLFGI AASFSAQVLA RRKEFGLLAH LGLTRRDILA VVAGEGMAWT TAGAIAGSLL GLGVAVILVH VVNPQSFHWT MELSLPWPRL LALAASVIAA GTLTAWLAGR AAAGREAVLA VKEDW
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