Gene Daci_5155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5155 
Symbol 
ID5750766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5720046 
End bp5722613 
Gene Length2568 bp 
Protein Length855 aa 
Translation table11 
GC content73% 
IMG OID641300279 
Producthypothetical protein 
Protein accessionYP_001566169 
Protein GI160900587 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.426312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCCC TGCTTCGCAC CTTTTCCTGG CAGGAGCTGC GCCAGCATCC CTGGCGCACG 
GCCACCGCCC TGGTGGCCAT CATGCTGGGC GTGGCCCTGG GCTTTGCCGT GCATGTGATC
AACCAGTCCG CGCTCGATGA GTTCTCGCGC GCCGTGCGCA CGGTCAGCGG CCAGCCGGAC
CTGGAGTTGC GTGCCATGCA GGGCGGCCTG CCCGAATCGC TGTATGGCCG TGTTGCGCAG
CAGCCCCAGG TCAGCCTGGC CGCCCCCTGG ATCGAAGCCA CGGCCCTGGC CGGCACCGCC
ACGCCGGTGC AGTTGCGCGT GCTGGGCGGC GATGCGCTGC GGCTGGCGCC CGTGGCGCCT
GCGCTCATGC CCCGGCTGTT CGATGGCGGC GGGCGGCTGG ACCTGTTCGC GCCCGATGCG
GTCTTCCTCA ATGCAACGGC ACTCGAAGCC CTGGGCCTGA CGCCGGAGCA GGCGCGGCAC
ACGCTCCTGC CATGGCAACT GGGCGGGCGC GCGCAGACCC TGCGCATCGC GGGCACGGTG
GCCGCATCCG GCCCGCCGCT GGCCGTGATG GACATCGGCG CGCTGCAGGA CAGCCTGCAG
CGCTGGGGCC AGGTGGACCG CATTGATGTG CTGCTGGCCG AAGGCGCCAC GCGCGAGTCC
CTGCTGGCCG AGCTGCGCCG CCTGCCCGAC TGGCCCGCCC AGGCCCTGGC CAGCCGCCCC
GGCGACGACC AGCAGCGCAT TGCCGAGATG TCGCGCGCCT ACCGCGTCAA CCTCACGGTG
CTGGCCCTGG TGGCGCTGTT CACGGGGGCG TTCCTGGTGT TCTCGGTGCT GGCGCTCAGC
GTGGCCCAGC GCGCGCCGCA GTTCGCCCTG CTGGCCGTGC TGGGATTGAC GCCGCGCCAG
CGCCTGGGCC TGGTGCTGCT GGAATCGCTG CTGCTGGGCA TGGTGGGCAG CGCGGCCGGC
ATTGCGCTGG GCGCGGGCCT GGCCTGGCTG GCCCTGCACC TGCTGGGCGG TGACCTGGGC
GGCGGCTACT TTGCCGGCGT GCAGCCTGCA CTGCAGTGGA GCGCCGGCGC CGCGCTGACC
TTTGGCCTGC TGGGCGTGGC CGCCACCGTG GCTGGCGGCT GGTGGCCGGC GCGCCAGGCC
ATGGAGTTGC CGCCCGCCGC CACGCTCAAG GGCCAGTGCG CCGGCTCTGA GCGCGCGGCG
CGTGGCCTGC CGGCCCTGCT GCTGATGGCA GCCAGCGTGG CCCTGGCCTT TGTGCCGCCC
GTGGCCGGCA TTCCCCTTGC CGCCTATGCC GCCGTGGCCC TGCTGCTGCT GGGCGGCATG
GCCGCCCTGC CCTGGCTGTT GGGCCAGCTG TTGCGCCTGG TGCCGCAATC GCTGCTGCGC
CAGCCGCTGG CCCTGCTGCC CGTGGAGCGT GCGCGGCGCA TGCGCCGCAG CACCACGGTG
GCCGTGGGCG GCGTGGTGGC CAGCCTGAGC CTGGCCGTGG CGCTGACCGT GATGGTGGCC
AGCTTCAGGG ACAGCATGAT CGCCTGGCTG GACGCCGTGC TGCCCGCCCC GCTGTACCTG
CGCACCGCCG GCAGCGCAGG CCGTGCCGAT GCCGCGCCCC TGCCCGCCGA TCTGGCCGCG
CGCATTGCCG CCCTGCCTGG CGTGCAGCGC GCCCAGCCCA TGCGCGGCAC CAGCCTGTGG
CTCAGCCCGG ATCGCCCCGC CGTCAGCCTG CTGCTGCGTC CGCTGCATGG CCCCCAGGGC
CAGCAGTTGC CGTGGATACA AGGCCCCGTG CAAGCACCCG CTGGCAGCAC GCCCGTCTAT
GTCAGTGAAG CCGTGGCCCA ACTCTATGGC GTGCGGCCGG GCCAGGAGTG GCCGCTGCTG
GCCCAGGCCC TGCCGTCCGG AAATTCCCGC GTGTTTGTGG CCGGCATCTG GCGCGACTAT
GTGCGCCAGT TCGGCGCCAT CGCCATGGAC TGGGAGGACT ACCAACGGCT CGCCGACGGC
AGCGCCACCA CGGCAGGCCC CACCGAAATC GCCATCTGGC CGGACGGCGA CGACACGGCC
ACGGCGCAAC AGCTTCAGGC GCGCATCCAG TCGCTGCTGA CCGGGCCGGG CGCCGCGCAG
GCACTGGAGT TCGCCAGCAG CGGCGCGCTG CGCGAGCGCT CCATGCGCAT CTTCGACCGC
AGCTTTGCCG TGACCTACTG GCTGCAGGCC GTGGCCATCG GCATCGGCCT GTTCGGCATT
GCCGCCAGCT TCAGCGCCCA GGTGCTGGCA CGGCGCAAGG AATTCGGCCT GCTCGCCCAC
CTGGGCCTGA CGCGGCGCGA CATCCTGGCC GTGGTGGCCG GCGAGGGCAT GGCCTGGACC
ACGGCGGGCG CCATCGCCGG CAGCCTGCTG GGCCTGGGCG TGGCGGTAAT CCTGGTGCAC
GTGGTGAATC CGCAAAGCTT TCACTGGACC ATGGAGCTGT CCCTGCCGTG GCCCCGCCTT
TTGGCGCTGG CTGCCAGCGT GATCGCAGCA GGCACGCTGA CGGCCTGGCT GGCCGGGCGT
GCAGCTGCAG GGCGCGAGGC AGTGCTGGCG GTCAAGGAGG ATTGGTAA
 
Protein sequence
MLALLRTFSW QELRQHPWRT ATALVAIMLG VALGFAVHVI NQSALDEFSR AVRTVSGQPD 
LELRAMQGGL PESLYGRVAQ QPQVSLAAPW IEATALAGTA TPVQLRVLGG DALRLAPVAP
ALMPRLFDGG GRLDLFAPDA VFLNATALEA LGLTPEQARH TLLPWQLGGR AQTLRIAGTV
AASGPPLAVM DIGALQDSLQ RWGQVDRIDV LLAEGATRES LLAELRRLPD WPAQALASRP
GDDQQRIAEM SRAYRVNLTV LALVALFTGA FLVFSVLALS VAQRAPQFAL LAVLGLTPRQ
RLGLVLLESL LLGMVGSAAG IALGAGLAWL ALHLLGGDLG GGYFAGVQPA LQWSAGAALT
FGLLGVAATV AGGWWPARQA MELPPAATLK GQCAGSERAA RGLPALLLMA ASVALAFVPP
VAGIPLAAYA AVALLLLGGM AALPWLLGQL LRLVPQSLLR QPLALLPVER ARRMRRSTTV
AVGGVVASLS LAVALTVMVA SFRDSMIAWL DAVLPAPLYL RTAGSAGRAD AAPLPADLAA
RIAALPGVQR AQPMRGTSLW LSPDRPAVSL LLRPLHGPQG QQLPWIQGPV QAPAGSTPVY
VSEAVAQLYG VRPGQEWPLL AQALPSGNSR VFVAGIWRDY VRQFGAIAMD WEDYQRLADG
SATTAGPTEI AIWPDGDDTA TAQQLQARIQ SLLTGPGAAQ ALEFASSGAL RERSMRIFDR
SFAVTYWLQA VAIGIGLFGI AASFSAQVLA RRKEFGLLAH LGLTRRDILA VVAGEGMAWT
TAGAIAGSLL GLGVAVILVH VVNPQSFHWT MELSLPWPRL LALAASVIAA GTLTAWLAGR
AAAGREAVLA VKEDW