| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5153 |
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| Symbol | |
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| ID | 5750764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5718304 |
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| End bp | 5719293 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641300277 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_001566167 |
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| Protein GI | 160900585 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.582545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.555738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCG CTTCCCCGCT CCCCTGCCTG GCCATCGCCG GCCCCACCGC TTCCGGCAAG
ACCGCTGCCG CCCTGGCCCT GGCCAGGCTG CTGGCCGAAC GCGGCCAGGC CGCAGAAATC
ATCAGCGTGG ACTCGGCCCT GGTCTATCGC GGCATGGACA TCGGCACGGC CAAGCCCACG
CCCGAAGAAC TGGCTGCCTG CCCCCATCAC CTGATCGATA TCCGCGACCC GCTGCAGGCC
TACAGCGCGG CCGAGTTCGT GCAGGACACG CAGCGCCTGG CGGCCGAGAT CCGCGCGCGC
GGCGCCCTGC CGCTGCTGGT GGGCGGCACC ATGCTGTATT TCAAGGCCCT GCAGGATGGC
ATTGACGACA TGCCGGCCGC CGACCCCGCC GTGCGCGAGC GGCTGGACGC CCAGGCCGCG
CAGATCGGCT GGCCCGCCAT GCATGCGCTG CTGGCCCAGG TCGATCCCGC CACGGCCGCA
CGCCTGGCGC CGGCCGACAG CCAGCGCATA CAGCGCGCGC TGGAGGTCTG GCACGTGTCG
GGCAAGCCGC TGTCCAGCTT TCATACGCGC AGTGGCAAGA ATGCCGAACA GGGCCTGGTC
AGCCCCGGCG GCTTCTTCTC GCTGGAGCCG CAGGACCGCG CCTGGCTGCA TGCGCGCATC
GCCCAGCGGT TCGACGCCAT GCTGGACGCC GGCTTCATCG ACGAGGTGCT GCAGCTGCGC
GCGCGCGGCG ACCTGCACCT GGACCTGCCC TCCATCCGCT GCGTGGGCTA CCGCCAGGCC
TGGGAATCGC TGGACGGCCT GTACTCCATG AACTCGCTGC GCGAACGCGG CATTGCCGCC
ACGCGCCAGC TGGCCAAGCG CCAGATCACC TGGCTGCGCA GCATGCCCGC CCGCCATGCC
ATTGCCTGCG ATACGCCCGA TGCCCAGCAG CAACTGCTGC AGGCTGCGAT GGCCGTGGTG
GCTGCAGCAA CCCAGGCCCG CAACGGCTGA
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| Protein sequence | MSTASPLPCL AIAGPTASGK TAAALALARL LAERGQAAEI ISVDSALVYR GMDIGTAKPT
PEELAACPHH LIDIRDPLQA YSAAEFVQDT QRLAAEIRAR GALPLLVGGT MLYFKALQDG
IDDMPAADPA VRERLDAQAA QIGWPAMHAL LAQVDPATAA RLAPADSQRI QRALEVWHVS
GKPLSSFHTR SGKNAEQGLV SPGGFFSLEP QDRAWLHARI AQRFDAMLDA GFIDEVLQLR
ARGDLHLDLP SIRCVGYRQA WESLDGLYSM NSLRERGIAA TRQLAKRQIT WLRSMPARHA
IACDTPDAQQ QLLQAAMAVV AAATQARNG
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