Gene Daci_5146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5146 
Symbol 
ID5750757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5709103 
End bp5709975 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content69% 
IMG OID641300270 
Producthypothetical protein 
Protein accessionYP_001566160 
Protein GI160900578 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1803] Methylglyoxal synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.886963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.124593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATAC GCCTGGGCCT GGCCGCCAAC CGAATCCACC ACCAAACCGA GGATGCCGCA 
CTGTTCGGCT GGCTGCGCGC CTGCGAGTCC GGCATTCGCG AGCTGCAGCT GGGCCTGCAT
GCCGTGGGCC GTACCTTCGA CGCCATCCAG GCCGCCGGCA TGCTGGCGTC CTACCGGGGC
CTGCGCCGCT ATCCCTATGG CCGCGAAGGC GGGCTGATGA AGCTGGTGGC CGAGGTGGTG
GGCGTGGAAG GCGACGAGCG CACGATTGAC GGCGCCATTT ATCTGACCGA CCCGGTCGAT
CCGTCCTCCA TCTTCCCCGA GGCCGTGGCG CTCAAGCGCC AATGCGTCAT CCACGGCAAG
CCCTTCCTGT CCACCGTGGC CTCGGCGCGC GACTGGATCG AGATGGAGCG CATCCATGCC
GGCCTTCCCA GGGATGCCGG CGCGCAGCGC TTCCATGACT ATGCGCAGCA GACGCTGGCG
CTGATCGCCC ACGATGCGCT CAAGCCCACC ATGCTGGATT TCGCGGCGCG CAACTTCGAG
CTGCTGTCGC GCTTTGGCCG GCGCGTGGGC ACGGGCACCA CGGGCCAGCG GCTCAACGAA
ATGGCCTGGA GCCGTGGCTG GCCCGAGGAC CGGCCCTGGG TGGACCGCTA CAACAGCGGC
CCGCTGGGCG GCGATGCGCA GATCGCCGAC CTGGTGCTGG ACCGCCGCTG CCAGCGCGTG
ATCTTCTTCG AGGACCCGCA TGTGGCGCGC CAGCACGAGG CCGACATCCA GCTGCTGGAG
CGCGCCGTGA CCACGGTGAC GCACGACACG GTCTGCACCA CTTCTCCGGC CGTGGCGCAG
CGCTGGTGCG ATGCGGCCTT GATGCGCCGC TGA
 
Protein sequence
MPIRLGLAAN RIHHQTEDAA LFGWLRACES GIRELQLGLH AVGRTFDAIQ AAGMLASYRG 
LRRYPYGREG GLMKLVAEVV GVEGDERTID GAIYLTDPVD PSSIFPEAVA LKRQCVIHGK
PFLSTVASAR DWIEMERIHA GLPRDAGAQR FHDYAQQTLA LIAHDALKPT MLDFAARNFE
LLSRFGRRVG TGTTGQRLNE MAWSRGWPED RPWVDRYNSG PLGGDAQIAD LVLDRRCQRV
IFFEDPHVAR QHEADIQLLE RAVTTVTHDT VCTTSPAVAQ RWCDAALMRR