Gene Daci_5144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5144 
Symbol 
ID5750755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5706749 
End bp5707468 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content55% 
IMG OID641300268 
Producthypothetical protein 
Protein accessionYP_001566158 
Protein GI160900576 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.261429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAT TCCTGAACAC CAGTGCGACA AACTACTTTC TTGAAGAACT GATCAAGGGA 
GCCACCGATC GCCTGATCCT GATCAGCCCG TTCCTGAAAC TGAACGACCG CATGAAGGAA
CTGCTGGCGG ACAAGAACCG CTTAAAGATC GATGTAAGGA TCGTCTATGG CAAGAGCGAA
TTGCAGCCAC AGGAAATCGA ATGGCTTCGC GGCCTGACCT TTGTCCGAAC CAGCTTTTGC
AAGAACCTGC ATGCCAAGTG CTACCTTAGC GAGACCATGT GCATCATCAC GAGCCTGAAC
CTGTACGAGT TCAGCCAGGT GAACAATAAC GAGATGGGCA TCCTGATTGA ACGTGCCGAG
GATGCGCAGC TCTACAGAGA CGCTTACGAC GAGGCCCAGC GCATCATCCG CATCAGCGAT
GAGGTTCGTA TTTCGATGGA GCGCGTATCA AACCCGAACC AGACTTCGGT TGAGGGTTCG
ACGGATGCGG CGGATGGGGA GCCCGCAACG GGTGGAAAGC TCACTTCCTC GAAGATCGCA
CACAAGCGTG GCTGGAAGAC GGCCCAGTTG CTCGAACGCG CGACAACTAT GGGCTACCTT
GCGCTTGACG GCGACCGCCA CGTCCTGACG GCAGCGGGAA CGCAGGCCGG CCTTGAGTTT
GTTCCCAAGT CCCGATTTGG CCCCTACTTT CTCTGGCCTG AGGACATCAA TCTCAGCTGA
 
Protein sequence
MTKFLNTSAT NYFLEELIKG ATDRLILISP FLKLNDRMKE LLADKNRLKI DVRIVYGKSE 
LQPQEIEWLR GLTFVRTSFC KNLHAKCYLS ETMCIITSLN LYEFSQVNNN EMGILIERAE
DAQLYRDAYD EAQRIIRISD EVRISMERVS NPNQTSVEGS TDAADGEPAT GGKLTSSKIA
HKRGWKTAQL LERATTMGYL ALDGDRHVLT AAGTQAGLEF VPKSRFGPYF LWPEDINLS