| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5141 |
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| Symbol | |
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| ID | 5750752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5700427 |
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| End bp | 5702649 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641300265 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001566155 |
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| Protein GI | 160900573 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.268323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0636547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGGCG ACAGCGCTTC CTTCTTCCTG CTCGATGAGC GCATCCAGCG CTTCCTATGG
GCCGAAGGCT GGGAGTCGCT GAGAGATGCC CAGGAGGCGG CCATTCCGCT CATCGTCAAG
GCGGACCGGG ACGTCATCGT GGCAGCCGCC ACGGCCGCCG GCAAGACGGA GGCGGCATTT
CTGCCGGCGC TGACGAAGCT GCTTCAGACG GAGTCACAGG GGCTCATCGT CTATGTCAGT
CCGCTCAAGG CGCTCATCAA TGACCAGTTC GGTCGCCTCG ACCGGCTGTG CGAGCAACTG
GAAATTCCGG TGTGGCCCTG GCATGGCGAC ATCTCTTCCT CGGCCAAGGC ACGATTCCTG
ACGAAGCGGC AAGGGGTCTT GCTCATCACG CCGGAATCTC TTGAGGCAAC GTTATGCCAT
CGAGGCACGT CGATCGGTGC GGTGTTCGAT CAGCTGACGT TCTTCATCGT CGACGAGCTT
CACGCCTTCA TCGGATCAGA GCGCGGAAAA CAGCTTCAAT CCCTGATGCA TCGCATTGAG
CGGGTCATCG GTCGCCAAGT GCCGCGTGTC GGCCTTTCCG CGACCTTGGG TGACATGCGC
CTGGCCGCCG ATTTTCTGCG TCCTGGACAA GGGACGTCGG TTGCCCTGGT GGAGTCGAAG
TCCTCGCACA GTGAGCTGAG AGTTCTGGTC AAAGGTTACG AGGAGCCCTT GGTCTTGCGC
AATGAAGATG GTGGCGAAGA GCCGGAACCC GTCACACCGG CGAAGATTGC CCTGCATCTG
TTCCGGGGCT TGCGCGGCAC GAACAATCTG GTCTTCCCGA ACTCGCGGCG TGAAGTCGAA
CGCTACACGT ACCTTCTCAA CCGACTTTGC GAGCAGGAGA AGGTGCCCAA TGAGTTCTGG
CCGCACCACG GCAGTCTGTC GAAGGAGATC CGCTCGGACA CCGAGGCTGC CCTGAAACAG
AAGGAATTTC CCGCGACCGC CCTCTGTACC AACACGCTGG AGTTGGGCAT CGACATTGGC
TCCGTCAAGA GCGTGGCCCA GATCGGCCCG CCACCGTCGG TGGCCAGCTT GCGACAGCGC
CTGGGGCGGT CTGGTCGCCG AAAGGGCGAG CCGGCCATCT TGCGAGGCTA CAGCGTGGAG
AACGCCCTTG GAGGGAAACC CTCGCTCGCC GACGAACTCC GTCTGGAGAC GGTGAAGGTG
ACGGCGATGA TCTCACTGCT GCTGGAAGGT TGGTTCGAAC CGCCCATGGC GCATGGCGTT
CACCTATCGA CACTGGTTCA GCAGATGCTG TCCTATGTGG CGCAGAGCGG AGGGGCATCC
ATCGGGCAAC TCCATACGAT GTTCTGTACT TCCGGCGCCC CTTTCACTGG GTTGAACAAA
GGCGAGTTTG CCGAACTCGT TCGCCATCTC GGCCAAAAGG AATTGCTGAT GCAGGAGTCC
AGCGGTCTTT TGCTGCATGG TCGCATCGGT GAGAAGTTCG TCAACCACTA CACCTTCTAT
GCTGCGTTTG CAGCAGACGA GGAGTTTCGT ATCGTCTGCA GCGGTAAAAC GCTCGGCACT
TTGCCGGTAT CGCTGATGCT CAGCGTTGGC CAGCGCATCC TGTTCGCCGG CAGGACCTGG
CTGGTAGAAG ACATCGACGA GGAGCAGAAG ACCATATTTG TCGTCCGCTC CGGTGGCGGA
GCGCCGCCGT TGTTCTCAGG TGGGGCAGGG CGTACCCACA CACGTGTTCA CCAGCGAATG
CACCAATTGT TCGAGTCCTC CGATATACCG CCGTTCCTGG ATGAAGTGGC CAGGCGGTTT
TTGGTGGAAG GCAGGGCGAA CTACTCTGAA CGAAATCTGG CGAATGACTT CATGGTGGAC
CAGGGCCGCG AAGTGGTGCT GCTGACCTGG CTCGGGGATG CCGCCAACGA AGCGCTGGCC
TGCCTGCTTC GCCGCAGAGG CTACTCGGCC AATGCGGCCG GCCCAGGCAT CGAAGTCATC
AAAGGAGATT TGGGTATCGA GGGGATCATC GATGCCCTCA TCGATACGGC AGTGGATGAG
CCTCCACCGC TCGACATGCT TCTGGCCGAT GTCCGCAACC TGCAGCGCGA GAAATGGGAC
TGGGCTTTGC CTGATGGACT TTTGCGCAAG GCGTATGCAA GTCTGTACCT GAACCTTGAA
GAGGCATTGT CCTGGGCGCA ATCGCTTGCC AGCGATCACT CAGCCCATGG CAGAAAGGCG
TAG
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| Protein sequence | MSGDSASFFL LDERIQRFLW AEGWESLRDA QEAAIPLIVK ADRDVIVAAA TAAGKTEAAF
LPALTKLLQT ESQGLIVYVS PLKALINDQF GRLDRLCEQL EIPVWPWHGD ISSSAKARFL
TKRQGVLLIT PESLEATLCH RGTSIGAVFD QLTFFIVDEL HAFIGSERGK QLQSLMHRIE
RVIGRQVPRV GLSATLGDMR LAADFLRPGQ GTSVALVESK SSHSELRVLV KGYEEPLVLR
NEDGGEEPEP VTPAKIALHL FRGLRGTNNL VFPNSRREVE RYTYLLNRLC EQEKVPNEFW
PHHGSLSKEI RSDTEAALKQ KEFPATALCT NTLELGIDIG SVKSVAQIGP PPSVASLRQR
LGRSGRRKGE PAILRGYSVE NALGGKPSLA DELRLETVKV TAMISLLLEG WFEPPMAHGV
HLSTLVQQML SYVAQSGGAS IGQLHTMFCT SGAPFTGLNK GEFAELVRHL GQKELLMQES
SGLLLHGRIG EKFVNHYTFY AAFAADEEFR IVCSGKTLGT LPVSLMLSVG QRILFAGRTW
LVEDIDEEQK TIFVVRSGGG APPLFSGGAG RTHTRVHQRM HQLFESSDIP PFLDEVARRF
LVEGRANYSE RNLANDFMVD QGREVVLLTW LGDAANEALA CLLRRRGYSA NAAGPGIEVI
KGDLGIEGII DALIDTAVDE PPPLDMLLAD VRNLQREKWD WALPDGLLRK AYASLYLNLE
EALSWAQSLA SDHSAHGRKA
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