Gene Daci_5138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5138 
Symbol 
ID5750749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5696704 
End bp5697564 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content72% 
IMG OID641300262 
Productalpha/beta hydrolase domain-containing protein 
Protein accessionYP_001566152 
Protein GI160900570 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.33776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACTT CCCCGTCGCT TCCGAACGGC CCCGCCGCCG GGGCGCAGAT TGCCGAAACA 
GAATTCTCCA TCGAGCTGCC CGAGCACGGC ACCGTGGCTG CGCGCGCCTA TGGTCAGCGC
AGGCCCGGCA CGGTCTCGCC GCTGGTGCTG CATTTCCATG GCGGCACCTT TGTCTGCGGC
ACGCTGGACA ACGGGCGCTA CATCGGCCGG CTGCTGGCCG AGGCGGGCGC CGTCGTGGTG
TCGCTGGCCT ACCCGCTGGC GCCCGAGCAT CCGTTTCCCC AGCCCATCGA GGTGGGCTAC
GCCGTGCTGC AGTGGCTGTA CAAGCACCGC GTGAAGATGG CGGGCAAGGG CGCGCCGCTG
TTCCTTGCGG GTGAAGAAGC CGGCGGCAAC CTGGCCGCCG CCGTGGCCGT GATCTCGCGC
GACCGGGGCC ATCCGCCGCT GGCGGGCCAG ATCCTGGTGT CGCCCATGCT CGATCCCTGC
ACCGGCACCG CCTCGCAGCG CGAGGCCACA CCCGAAGCCG GCGAATGCCG CTGGGCCACG
GGCTGGCGCG AGTACCTGAG CTGCCCCAAG GACGCCATGC ACCCCTATGC CGTACCCGGC
AGCTCGCTGC GCCTGGCCCA GTTGCCGCCG GCCCTGGTGC TGGTGGGCGG TGACGACCCG
CTGCGCGACG AGGCCCAGGC CTATGCGGCC CGCCTGCGCG CGGCCGGCGT GACAGCCAGC
AGCCATGTGC TGCCCAGCGC GTCGAACTGG CCGCAGGCCC TGTCCGAGGC CGAGGCCTGT
ACGGCCTGCA GCGCCGCCGT GTTCCAGCAT GTGCATGACT TCTTCGAGGC CACCATGAAC
AAGCCCGCAG CACCGGGCTA G
 
Protein sequence
MSTSPSLPNG PAAGAQIAET EFSIELPEHG TVAARAYGQR RPGTVSPLVL HFHGGTFVCG 
TLDNGRYIGR LLAEAGAVVV SLAYPLAPEH PFPQPIEVGY AVLQWLYKHR VKMAGKGAPL
FLAGEEAGGN LAAAVAVISR DRGHPPLAGQ ILVSPMLDPC TGTASQREAT PEAGECRWAT
GWREYLSCPK DAMHPYAVPG SSLRLAQLPP ALVLVGGDDP LRDEAQAYAA RLRAAGVTAS
SHVLPSASNW PQALSEAEAC TACSAAVFQH VHDFFEATMN KPAAPG