| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5137 |
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| Symbol | |
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| ID | 5750748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5695306 |
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| End bp | 5696589 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641300261 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001566151 |
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| Protein GI | 160900569 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.259338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCG AATCCACCTC ATCCTCTTCT TCCCCTTCTT TCGCTTCGGC CCCGCGCAAG
GGCTGGAGGC TGCCTGCCGC CGCTGCGGCC ATCCTCGCCG TCAGCGCCGG CCTGTTCGGC
CTGCATGGCT TCGATGCCAA GGCTGATGAC GCGCCCGCCA GCGCCCAGCC CGCCGCCACG
CCCGTGTCGG TGGCCACGGT CGCCGAAAGC GAGGTCACCG CCTGGGACGA GTTCTCGGGC
CGCCTTGAAG CCGTGGAGCG CGTGGACATC CGCTCGCGCG TGGCTGGCGC CGTGCAGGCC
GTGCACTTTC GCGAGGGCGC GCTGGTCAAG CAGGGCGATC TGCTGATCAC CATCGACCCC
GCACCGTATG CGGCCGAGGT CGAGCGGGCC GAAGCCCAGG TGGCCTCGGC CCAGGCACGC
CAGTCCTATG CACGCAGCGA GCAGGAGCGC GCACGCCGCC TGTGGGACGA GCGGGCGATT
GCCCAGCGCG AGCTGGACGA GCGCATCAAC GCGGGCAGCG AGGCCGAGGC CAATCTGCGC
GCGGCCCAGG CGTCCCTGCA ATCGGCGCGG CTGAACCTGG GCTACACCCA GGTGCGCGCC
CCCGTGTCGG GCCGCATCGG CAAGCGCGAG ATCACCGTGG GCAACCTGGT GGCCGCAGGC
CCGGGCGCGC CGGTGCTGAC CACGCTGGTC TCGGTCAGCC CCATCTATGC GAGCTTCGAT
GCCGATGAGC AGGTCATCAC GCGCGCGCTC AAGGAGCTCG GCGGCGGCGC GGGCAACCGC
GCCAGGATCG ACAGCATTCC CGTGCAGATG GGCACGGCCA CGGCCGGCAG CACGCCCTTC
GAGGGCCGGC TGCAGCTGAT CGACAACCAG GTCGATGCCC GAAGCGGCAC GGTGCGCGTG
CGCGCCGCCT TCGACAACAA GGACGGCGCC CTCATGCCCG GCCAGTTCGC CCGCATCCGC
ATGGGCCAGG CGCGCGACAG CAGCATGCTG CTGGTCAGCG AGCGCGCCAT CGGCACGGAC
CAGAGCAAGA AGTACGTGAT GGTGGTGGGC GACGACAACA AGGCCGTCTA CCGCGAGGTG
GCCCTGGGCG CCTCGGTCAA CGGCCTGCGC AACGTGACCC AGGGCCTGCA GCCCGGCGAG
CGCGTGGTGG TCAACGGCCT GCAGCACATC CGCCCCGGCG CCCTGGTCGC GCCCAAGGAG
GTGTCCATGG ATGCGCGGGC CGATGCCCGC CAGCCGGGCA CCCGGCAGGC AGCCGAACAA
GTGGCTGACG CAACCAAGTC CTGA
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| Protein sequence | MSTESTSSSS SPSFASAPRK GWRLPAAAAA ILAVSAGLFG LHGFDAKADD APASAQPAAT
PVSVATVAES EVTAWDEFSG RLEAVERVDI RSRVAGAVQA VHFREGALVK QGDLLITIDP
APYAAEVERA EAQVASAQAR QSYARSEQER ARRLWDERAI AQRELDERIN AGSEAEANLR
AAQASLQSAR LNLGYTQVRA PVSGRIGKRE ITVGNLVAAG PGAPVLTTLV SVSPIYASFD
ADEQVITRAL KELGGGAGNR ARIDSIPVQM GTATAGSTPF EGRLQLIDNQ VDARSGTVRV
RAAFDNKDGA LMPGQFARIR MGQARDSSML LVSERAIGTD QSKKYVMVVG DDNKAVYREV
ALGASVNGLR NVTQGLQPGE RVVVNGLQHI RPGALVAPKE VSMDARADAR QPGTRQAAEQ
VADATKS
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