| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5133 |
|---|
| Symbol | |
|---|
| ID | 5750744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 5688093 |
|---|
| End bp | 5689316 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641300257 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_001566147 |
|---|
| Protein GI | 160900565 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.519765 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATTG AACCGCCCGT TTCCACCATG GCTGAAGCCG CCGATCCGGT GCTGCCCGGC
ATACGCGCCA CGCAGGCCGA GATGGTGGCC CTGCGCCATC ACCTGCATGC CCATCCCGAG
CTGGCCTTCG AGGAGTTCGC CACCAGCGAC TTGGTGGCCG AGCGCCTGGC CTCCTGGGGC
TACGAAGTGC ACCGGGGCCT GGGAGGCACG GGCGTGGTCG GCACGCTGCG GGTCGGAGCA
GGCACGCGGC GCCTGGGCCT GCGCGCCGAC ATGGACGCGC TGCCCATCCA CGAGCAGACC
GGCCTGCCCT ATGCCAGCCG CCACGCGGGC CGCATGCATG CCTGCGGGCA TGACGGCCAT
ACCGCCATCC TGCTGGCCGC CGCGCGCGAG CTGGCCCAGG CGCGCGGCTT CGACGGCACG
CTGCACCTGA TCTTCCAGCC GGCCGAGGAG GGCCTGGGCG GGGGCCGCAA GATGGTGGAG
GATGGCCTGT TCGATCTTTT CCCCTGCGAT GCCATCTTTG CGCTGCACAA CATGCCGGGC
TTTGCAGAGG GGCAGTTCGG CTTTCGCGAG GGCTCGTTCA TGGCTTCGTC GGACACGGTG
ATCATCACCG TGCGCGGCAA GGGCGGCCAT GGCTCGGCGC CCCACCTGTC GGCCGACCCG
GTGGTGGCGG CGGCCCACCT GGTGCTGGCG CTGCAGACCG TGGTCTCGCG CAATGTCGAT
CCCCGCGACA TGGCCGTGGT CAGCGTGGGC GCCATCCATG GCGGCGATGC GCCCAACGTG
ATCCCCGGCG AGGTGGAGCT GCGCCTGTCC GTGCGCGCCT ACCGGCCCGA GGTGCGTGCC
CTGCTGCGCG AACGCATCAC CGCCCTGGCC CATGCCCAGG CCGCCACGCT GGGGGCCGAG
GCCGTGGTGG ACTACCGCTG GCGCTATCCG GCCCTGGTCA ACGACGCGGC CAGCACGGTC
TTCGCCCGCG AGGTGGCGCG CGACTGGCTG GGCGAGCAGG CGCTGATCCC CGACCTGCAG
CCGCTGACGG GCAGCGAGGA CTTCTCCTTC ATGCTCGAAC AATGCCCTGG CAGCTATCTG
ATCGTGGGCA ACGGCGTGGG CGACACGCAT GGCACGGGCG GCTGCATGGT CCACAACCCC
GGCTACGACT TCAACGACCG CATCCTGCCG CTGGCCGCCA CCTACTGGGT GAAGCTGGCC
CGGCGCTTTC TGTCCGCCGC CTGA
|
|---|
| Protein sequence | MNIEPPVSTM AEAADPVLPG IRATQAEMVA LRHHLHAHPE LAFEEFATSD LVAERLASWG
YEVHRGLGGT GVVGTLRVGA GTRRLGLRAD MDALPIHEQT GLPYASRHAG RMHACGHDGH
TAILLAAARE LAQARGFDGT LHLIFQPAEE GLGGGRKMVE DGLFDLFPCD AIFALHNMPG
FAEGQFGFRE GSFMASSDTV IITVRGKGGH GSAPHLSADP VVAAAHLVLA LQTVVSRNVD
PRDMAVVSVG AIHGGDAPNV IPGEVELRLS VRAYRPEVRA LLRERITALA HAQAATLGAE
AVVDYRWRYP ALVNDAASTV FAREVARDWL GEQALIPDLQ PLTGSEDFSF MLEQCPGSYL
IVGNGVGDTH GTGGCMVHNP GYDFNDRILP LAATYWVKLA RRFLSAA
|
|---|
| |