Gene Daci_5118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5118 
Symbol 
ID5750729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5669754 
End bp5670716 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content65% 
IMG OID641300242 
Producthypothetical protein 
Protein accessionYP_001566132 
Protein GI160900550 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.534032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGTC GCAGCTGGAT GGGCCTGACC CTGGTCCTCG CAAGCACCGG AGCCCTGGCC 
CAGGCCTATC CCACCAAGCC GATCAAGCTG GTGGTGCCCT TCGCCCCCGG TGGCACGACC
GACATCATCG CCCGCGTGAT CGCCGAACCC CTGACCAAGG AACTGGGCCA GCCCGTGGTG
GTGGACAACC GCGGCGGCGG CGGCGGCGTC ATCGGCGCCA TGGAAACCGC GCGCTCGCAG
CCCGATGGCT ACAGCCTGGG CATCGCCACG GTCTCGACCA CGGCGACCAA CCCCGCGATC
AACCCCAAGA TCTCGTACAA CACACTGACG GACTTCACGC CCATCATCAA CGTGGCGGCC
ACGCCCAACG TGATTGCGGT GAACCCCAAG TTCCCCGCCA AGGACTACAA GAGCTTCGAG
GCCGAACTCA AGAAGTCCCA GGGCAAGTAC TCCTATGCCT CCTCGGGCAC GGGCGGCATC
CAGCACATGC TGATGGAGCT GTACAAGAGC CTGACCAACA CCTTCGTCAC CCACATCCCC
TACCGCGGTG CGGGCCCGGC GCTCAACGAC GTGGTGGCGG GCCAGGTGCC CATGGTGCTG
GACAACCTGC CCTCGGCCCT GCCGTTCATC AAGGACAACC GCCTGGTGCC CATCGTGGTG
GCCGCGCCCC AGCGCCTGGC CGTGCTGCCC AATGTGCCCA CCTTCAAGGA AGTGGGCCTG
GAGCCGGTGA ACCGCATGGC CTACTACGGC ATCCTGGGCC CCAAGAACAT GCCCAAGGAC
GTGGTGGACA AGATCAACGC CGCCGTGCGC AAGGTGCTGC AGGACCCGGC CGTGCGCAAG
CGCATCGAGG ACACGGGCTC CCTGGTCATC GGCAACTCGC CTGAAGAGTT CGCCAAGCAG
ATCAAGGACG AGTACGAGAC GTACAAGAAG GTGGTTGCTC AGCAAAAACT CACGCTGGAG
TAA
 
Protein sequence
MNRRSWMGLT LVLASTGALA QAYPTKPIKL VVPFAPGGTT DIIARVIAEP LTKELGQPVV 
VDNRGGGGGV IGAMETARSQ PDGYSLGIAT VSTTATNPAI NPKISYNTLT DFTPIINVAA
TPNVIAVNPK FPAKDYKSFE AELKKSQGKY SYASSGTGGI QHMLMELYKS LTNTFVTHIP
YRGAGPALND VVAGQVPMVL DNLPSALPFI KDNRLVPIVV AAPQRLAVLP NVPTFKEVGL
EPVNRMAYYG ILGPKNMPKD VVDKINAAVR KVLQDPAVRK RIEDTGSLVI GNSPEEFAKQ
IKDEYETYKK VVAQQKLTLE