| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5117 |
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| Symbol | |
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| ID | 5750728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5668694 |
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| End bp | 5669677 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641300241 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_001566131 |
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| Protein GI | 160900549 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.843466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAG TGCCTGTTGC TTCCATCGCT TCCCCATCGG CTGCCGAAGC CGAATCTGCT
GCCGATCCTG CATCCTGGCC GGCGCCGCTG CCGGCCAGCC TGGATGCGCT GGACCTGTTC
ATGGATGCGC TGCTGCTGGA GGACGGGCTG TCGCGCAATA CGCTGGCGGC CTATCGCCGG
GATCTGACGG CCTGGGGGCG GTGGCTGGCG CACCAGCAGC CGCCGCTGGC GCTGGATGCT
GCGGGCGAGC TGGAGCTGCA GGGCTATTTC GCGGTGCGGG TGGAGCAGAC CAAGGCCAGT
TCTTCCAACC GGCGGCTGAC GGTGCTGCGC CGCTACTACC ACTGGGCGCT GCGCGAGCAG
CGCATTGCCG CCGATCCCAC GGCACGCATG CTGGCGGCCC GGCAGCCGCC GCGCGTGCCG
CATACGCTGA CGCAGGCGCA GGTGGAGGCA CTGCTCAGGG CGCCCGATGT CGATACGCCG
CTGGGCCTGC GTGACCGCGC CATGCTGGAG CTGATGTATG CCAGCGGCCT GCGCGTGAGC
GAGCTGGTGG ATCTGCCCTT GCATGGCATC GATCTGCGCT CGGGCGTGTT GCGCGTGACG
GGCAAGGGGC AAAAGGAAAG GCTGGTGCCC TTCGGCCAGG AGGCGCACTG GTGGCTGGAG
CGCTATCTGG CCACGGCGCG CGGTGCCATC CTGGGCGGGC AGCGCAGCGA TGCGGTCTTC
GTGACCCAGC GCGGGGCTGC GATGAGCCGC GTGATGTTCT GGGTCATCGT CAAGCGCTGC
GCGCAGGTTG CGGGTGTCAC GGCACCGCTG TCGCCGCACA CGCTGCGCCA TGCCTTCGCC
ACCCACCTGC TCAACCATGG CGCAGACCTG CGCGTGGTGC AGATGCTGCT GGGCCATGCC
GACATCTCCA CCACCACCAT CTACACCCAT GTGGCGCGCG AGCGGCTCAA GGCATTGCAC
GCTTTGCACC ATCCGCGTGG TTGA
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| Protein sequence | MSQVPVASIA SPSAAEAESA ADPASWPAPL PASLDALDLF MDALLLEDGL SRNTLAAYRR
DLTAWGRWLA HQQPPLALDA AGELELQGYF AVRVEQTKAS SSNRRLTVLR RYYHWALREQ
RIAADPTARM LAARQPPRVP HTLTQAQVEA LLRAPDVDTP LGLRDRAMLE LMYASGLRVS
ELVDLPLHGI DLRSGVLRVT GKGQKERLVP FGQEAHWWLE RYLATARGAI LGGQRSDAVF
VTQRGAAMSR VMFWVIVKRC AQVAGVTAPL SPHTLRHAFA THLLNHGADL RVVQMLLGHA
DISTTTIYTH VARERLKALH ALHHPRG
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