Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5117 |
Symbol | |
ID | 5750728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5668694 |
End bp | 5669677 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641300241 |
Product | tyrosine recombinase XerD |
Protein accession | YP_001566131 |
Protein GI | 160900549 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.843466 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAAG TGCCTGTTGC TTCCATCGCT TCCCCATCGG CTGCCGAAGC CGAATCTGCT GCCGATCCTG CATCCTGGCC GGCGCCGCTG CCGGCCAGCC TGGATGCGCT GGACCTGTTC ATGGATGCGC TGCTGCTGGA GGACGGGCTG TCGCGCAATA CGCTGGCGGC CTATCGCCGG GATCTGACGG CCTGGGGGCG GTGGCTGGCG CACCAGCAGC CGCCGCTGGC GCTGGATGCT GCGGGCGAGC TGGAGCTGCA GGGCTATTTC GCGGTGCGGG TGGAGCAGAC CAAGGCCAGT TCTTCCAACC GGCGGCTGAC GGTGCTGCGC CGCTACTACC ACTGGGCGCT GCGCGAGCAG CGCATTGCCG CCGATCCCAC GGCACGCATG CTGGCGGCCC GGCAGCCGCC GCGCGTGCCG CATACGCTGA CGCAGGCGCA GGTGGAGGCA CTGCTCAGGG CGCCCGATGT CGATACGCCG CTGGGCCTGC GTGACCGCGC CATGCTGGAG CTGATGTATG CCAGCGGCCT GCGCGTGAGC GAGCTGGTGG ATCTGCCCTT GCATGGCATC GATCTGCGCT CGGGCGTGTT GCGCGTGACG GGCAAGGGGC AAAAGGAAAG GCTGGTGCCC TTCGGCCAGG AGGCGCACTG GTGGCTGGAG CGCTATCTGG CCACGGCGCG CGGTGCCATC CTGGGCGGGC AGCGCAGCGA TGCGGTCTTC GTGACCCAGC GCGGGGCTGC GATGAGCCGC GTGATGTTCT GGGTCATCGT CAAGCGCTGC GCGCAGGTTG CGGGTGTCAC GGCACCGCTG TCGCCGCACA CGCTGCGCCA TGCCTTCGCC ACCCACCTGC TCAACCATGG CGCAGACCTG CGCGTGGTGC AGATGCTGCT GGGCCATGCC GACATCTCCA CCACCACCAT CTACACCCAT GTGGCGCGCG AGCGGCTCAA GGCATTGCAC GCTTTGCACC ATCCGCGTGG TTGA
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Protein sequence | MSQVPVASIA SPSAAEAESA ADPASWPAPL PASLDALDLF MDALLLEDGL SRNTLAAYRR DLTAWGRWLA HQQPPLALDA AGELELQGYF AVRVEQTKAS SSNRRLTVLR RYYHWALREQ RIAADPTARM LAARQPPRVP HTLTQAQVEA LLRAPDVDTP LGLRDRAMLE LMYASGLRVS ELVDLPLHGI DLRSGVLRVT GKGQKERLVP FGQEAHWWLE RYLATARGAI LGGQRSDAVF VTQRGAAMSR VMFWVIVKRC AQVAGVTAPL SPHTLRHAFA THLLNHGADL RVVQMLLGHA DISTTTIYTH VARERLKALH ALHHPRG
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