| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5115 |
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| Symbol | |
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| ID | 5750726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5666196 |
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| End bp | 5667485 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300239 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001566129 |
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| Protein GI | 160900547 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.959026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCA ACGACAACTC CTCCGCTCCG CCACCACCCC TGCCAGAGGG AGTGGAGGAC
GGACAGGTGG CCGTCATTGC GCGCCAGGCC ATCGTCAACG AGGCGCGCGA TGTCTTCGGC
TATGAACTCT TCGATCGCTC CACAGCCCAG CATGCGCACA CGGCGGCCTC CGATGCCGCC
CTGCTGTTCA ACGCACTGTC GTATGCGGGA GCCGAGGCGC TGGTGGGCAA GAAGACGGTC
TTCATCAACT GCACGCATGA CAGCCTGGCC GGCGGCCACC TGGAACTGAT CCACCCCGAC
AAGGTGGTGC TGGAAGTGAC CACGCTGGGC GAGAACGCCA CCACAGCCGA TATCGAAGAG
CGCCTGCCCA CCTTCCAGGC CCTGCGCCAG CGCGGCTTCC GCCTGGCCTT CAACCAGCAC
CTGCTGCGCC GCGCCTATGC CAGCTGGCTG CCTGCGGCCG CATTCATCAA GCTGGACATG
CAGACCTTTG CGCTGGCCGA TGCCGAGACC CTGGTGAATT TCGCGCGCGC CCATACCAAT
GCCCAGATCG TGGCCGAGAA GGTCGAGACC TCCGAGCAGT TCGAGCGCAT GCGCGACCTG
GGCGTGCGGC TGTTCCAGGG CTTCTGGTTC GCCCAGCCGC AGCTGGTGCA GGCGCGCACC
ATCCGCCCCA CGCAGGCCAC CATCATCCAG CTGATCAACC TGGTGCGCCA GCAGGCCAGC
ACGGACGAGA TCGAGGCCCT GCTCAAGAAG GACCCCACGC TGTCCTTCAA CCTGCTGCGC
TTCATCAACT CCTCGGGCTT CGGCCTGTCC TGCGAGATCA CCTCGTTCCG CCACGCGGTG
ATGATCCTGG GCCTCAAGAA GCTGTTCCGC TGGGCGGCCC TGCTTTTGAC CACCTCGCGC
GCGGGCGGCA CGCCGCCGGC CGTGGGCCAG ACCGCCGTGG TGCGCGGACG CCTGATGGAG
CTGCTGACGG CCGAGCTGCT CTCGCCCGAG GAATGCGACA ACGCCTTCGT GGTGGGCGTG
TTCTCGCTGC TGGACGTGAT GCTGGGCCAG CCCATGGAAA AGGCGCTGGA ATCCATCGCC
CTGCCCCAGC CCGTGATCGA TGCGCTGGTG CACAACAAGG GCGTGTTCGC GCCCTTCCTG
GAGCTGACGC GCGCCTGCGA AAGCGGCGAC GACGAAGGCT TTGCGCGCGC CGCCAACGCC
TTGCAGCTGT CCAACCACCA GGTCAACTGG GCGCACCTGC AGGCCCTGGC CTGGGCCGAC
AACCTCACGG CGGACGACGC CACGGTCTGA
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| Protein sequence | MTTNDNSSAP PPPLPEGVED GQVAVIARQA IVNEARDVFG YELFDRSTAQ HAHTAASDAA
LLFNALSYAG AEALVGKKTV FINCTHDSLA GGHLELIHPD KVVLEVTTLG ENATTADIEE
RLPTFQALRQ RGFRLAFNQH LLRRAYASWL PAAAFIKLDM QTFALADAET LVNFARAHTN
AQIVAEKVET SEQFERMRDL GVRLFQGFWF AQPQLVQART IRPTQATIIQ LINLVRQQAS
TDEIEALLKK DPTLSFNLLR FINSSGFGLS CEITSFRHAV MILGLKKLFR WAALLLTTSR
AGGTPPAVGQ TAVVRGRLME LLTAELLSPE ECDNAFVVGV FSLLDVMLGQ PMEKALESIA
LPQPVIDALV HNKGVFAPFL ELTRACESGD DEGFARAANA LQLSNHQVNW AHLQALAWAD
NLTADDATV
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