Gene Daci_5112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5112 
Symbol 
ID5750723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5663286 
End bp5663810 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content66% 
IMG OID641300236 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001566126 
Protein GI160900544 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.846878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTT ATGAACTGGA TGGAGTGGCC CCTGAAGTGG CAGCATCGGC CTGGGTGGCC 
GACAGCGCCG AGGTCATGGG CAATGTGCAG CTGGCCGAAG ACGCCAGCAT CTGGTTCGGC
GCCGTGCTGC GCGGCGACTG CGAGAGCATT TCCATCGGCG AGGGAAGCAA CATCCAGGAC
GCCAGCGTGC TGCATGCCGA CCTGGGCAAG CCGCTGGTCG TGGGGCGCCA TGTGACCGTG
GGCCACCAGG TCATGCTGCA TGGCTGCACC ATCGGCGACG AGTCGCTGAT CGGCATCGGT
GCCGTGGTGC TCAACGGCGC GAAGATCGGC AGGAACTGCC TGGTCGGCGC AGGCGCCCTC
ATCACCGAGG GCAAGGAGTT TCCCGATGGC TCGATGATCA TCGGCAGCCC GGCCAAGGCC
GTGCGCCAAT TGACGCCCGA GCAGATCGAA GGCTTGCGCC GCAGCGCCCA ACACTATGTC
GATAATGCGC GCCGGTTCAA GACCGGGCTG CGCAAGCTGG GCTGA
 
Protein sequence
MAIYELDGVA PEVAASAWVA DSAEVMGNVQ LAEDASIWFG AVLRGDCESI SIGEGSNIQD 
ASVLHADLGK PLVVGRHVTV GHQVMLHGCT IGDESLIGIG AVVLNGAKIG RNCLVGAGAL
ITEGKEFPDG SMIIGSPAKA VRQLTPEQIE GLRRSAQHYV DNARRFKTGL RKLG