Gene Daci_5111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5111 
Symbol 
ID5750722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5662258 
End bp5663250 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content66% 
IMG OID641300235 
ProductHsp33 protein 
Protein accessionYP_001566125 
Protein GI160900543 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1281] Disulfide bond chaperones of the HSP33 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.950978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGAAC TGCATAAATT CATCTTCGAA GGCCTGCCCG TGCGCGGCTC CATCGTCCGC 
CTCACCGACG CCTGGCAGGA AATCCTGCAA CGCCGCGCGG GCAACGGAGA GACCGGCGCC
TACCCCGCTG CCGTGCGCGA ACTGCTGGGC GAAATGGCGG CTGCCGGCGT GCTCATGCAG
TCCAACATCA AGTTCAACGG CGCCCTGGTC TTCCAGGTCA TGGGCGACGG CCCGGTCAAG
CTGGCCGTGG CCGAGGTGCA GTCCGACTTC GGCCTGCGCG CCACCGCCAC CCTGATCGGG
GAAGCGCCCG AAGGCGCCAC GCTGGAGCAA CTGCTCAATG TGAATGGTGG TGGCCGTTGC
GCCATCACGC TGGACCCCAA GGGACGCCAG CCGGGCCAGC AGCCCTACCA GGGCGTGGTG
CCGCTGCAGG ATGCGCAAGG CCGCAGGTTC TCCAAGGTGT CCGATGCACT GCAGCACTAC
ATGCTGCAGT CCGAGCAGCT GGACACCGTG CTGGTGCTGG CCGCCAATGA CCAGTTGGCT
GCCGGCCTGC TGATCCAGCG CATGCCGGTC AAGGGCGAGG CCAACCTGGC CTCCGCCACC
GAAAGCGAGC AATCGGGCCA GGACGCCATC GGCCTGAACG AGGACTACAA CCGCATCGCC
ACGCTGGCCG CCAGCCTGAC GCGCGACGAA CTGCTCACGC TGGATGTGGA AACCATCCTG
CGGCGCCTGT TCTGGGAAGA GAAGCTGATG CGCTTCGTCC CCCAGCAGGA CGAAGAGCGC
CCGCGCTTTG CCTGCACCTG CAGCCGTGAG CGCGTGGGGG CCATGCTGGT CTCGCTGGGC
ATTGAAGAGG TGGACAGCAT CCTGGAGGAG CGCGGCAATA TCGAGGTGGG CTGCGACTTC
TGCGGCAAGC AGTACGAGTT CGATCCCATC GATGCCGCCC AGCTGTTCAC CGAGGCCGGC
AAGCAGCCGC CGACCTCGAC GAACGTGCAG TAA
 
Protein sequence
MSELHKFIFE GLPVRGSIVR LTDAWQEILQ RRAGNGETGA YPAAVRELLG EMAAAGVLMQ 
SNIKFNGALV FQVMGDGPVK LAVAEVQSDF GLRATATLIG EAPEGATLEQ LLNVNGGGRC
AITLDPKGRQ PGQQPYQGVV PLQDAQGRRF SKVSDALQHY MLQSEQLDTV LVLAANDQLA
AGLLIQRMPV KGEANLASAT ESEQSGQDAI GLNEDYNRIA TLAASLTRDE LLTLDVETIL
RRLFWEEKLM RFVPQQDEER PRFACTCSRE RVGAMLVSLG IEEVDSILEE RGNIEVGCDF
CGKQYEFDPI DAAQLFTEAG KQPPTSTNVQ