Gene Daci_5108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5108 
Symboleno 
ID5750719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5660012 
End bp5661298 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content65% 
IMG OID641300232 
Productphosphopyruvate hydratase 
Protein accessionYP_001566122 
Protein GI160900540 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0148] Enolase 
TIGRFAM ID[TIGR01060] phosphopyruvate hydratase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.967957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.613587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAA TCGTTGACAT CGTAGGCCGC GAAGTGCTGG ACAGCCGCGG CAACCCCACC 
GTCGAGTGCG ACGTGCTGCT GGAATCGGGC GTGATGGGCC GCGCCGCCGT GCCTTCGGGC
GCGTCCACCG GCTCGCGCGA AGCCATCGAG CTGCGTGACG GCGACAAGAG CCGCTACCTG
GGCAAGGGCG TGCTCAAGGC CGTCGAGCAC ATCAACACCG AGATCTCCGA AGCCGTGCTG
GGCCTGGACG CCTCCGAGCA GGCCTTCCTG GACAAGACCC TGATCGACCT GGACGGCACC
GACAACAAGG GCCGCCTGGG CGCCAACGCC ATGCTGGCCG TCTCCATGGC CGTGGCCCGC
GCCGCAGCCG AAGAGGCCGG CCTGCCGCTG TACCGCTACC TGGGCGGCAT GGGCGGCATG
CAGCTGCCCG TGCCGATGAT GAACGTCATC AACGGCGGCG CGCACGCCAA CAACAGCCTG
GACCTGCAGG AATTCATGAT CATCCCCGTG GGCGCGCCGT CGTTCCGCGA AGCCGTGCGC
TGGGGCGCCG AAGTCTTCCA CGCGCTCAAG AAGATCATCC ACGACAAGGG CATGAGCACG
GCCGTGGGCG ACGAAGGCGG TTTTGCGCCT TCCGTGGAAA ACCACGAAGC CGCCATCCAG
CTGATCCTGC AGGCCATCGA AAACGCAGGC TACAAGGCCG GCGAACAGAT CGCCCTGGGC
CTGGACTGCG CCGCCAGCGA GTTCTACAAG GACGGCATGT ACGTGCTGGC CGGTGAAGGC
AACCTGACGC TGACCGCCAC CCAGTGGACC GACATGCTGG CCGGCTGGTG CGACAAGTAC
CCCATCATCT CCATCGAGGA CGGCATGGCC GAAGGCGACT GGGATGGCTG GAAGATCCTG
ACCGACCGCC TGGCCGCCAA GGTCCAGCTG GTGGGCGACG ACCTGTTCGT CACCAACACC
AAGATCCTGA AGGAAGGCAT CGACAAGAAG ATCGCCAACT CCATCCTGAT CAAGATCAAC
CAGATCGGCA CGCTGACCGA AACCTTCGCC GCCATCGAAA TGGCCAAGCG CGCGGGCTAC
ACGGCCGTGA TCTCGCACCG CTCCGGTGAA ACCGAGGATT CGACGATTGC CGACATCTCC
GTGGGCACCA ATGCGGGCCA GATCAAGACC GGCTCGCTGA GCCGTTCGGA CCGCATCGCC
AAGTACAACC AGCTGCTGCG CATCGAGGAA GACCTGGGTG ACATCGCCCA CTACCCCGGC
CGCGAGGCTT TCTACAACCT GCGCTGA
 
Protein sequence
MSAIVDIVGR EVLDSRGNPT VECDVLLESG VMGRAAVPSG ASTGSREAIE LRDGDKSRYL 
GKGVLKAVEH INTEISEAVL GLDASEQAFL DKTLIDLDGT DNKGRLGANA MLAVSMAVAR
AAAEEAGLPL YRYLGGMGGM QLPVPMMNVI NGGAHANNSL DLQEFMIIPV GAPSFREAVR
WGAEVFHALK KIIHDKGMST AVGDEGGFAP SVENHEAAIQ LILQAIENAG YKAGEQIALG
LDCAASEFYK DGMYVLAGEG NLTLTATQWT DMLAGWCDKY PIISIEDGMA EGDWDGWKIL
TDRLAAKVQL VGDDLFVTNT KILKEGIDKK IANSILIKIN QIGTLTETFA AIEMAKRAGY
TAVISHRSGE TEDSTIADIS VGTNAGQIKT GSLSRSDRIA KYNQLLRIEE DLGDIAHYPG
REAFYNLR