| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5089 |
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| Symbol | |
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| ID | 5750700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5642247 |
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| End bp | 5643143 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641300213 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_001566103 |
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| Protein GI | 160900521 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00525746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACATCCT CCTCCGTCGC TCTCACTGGC AGCATCGTTG CCCTCATCAC GCCCATGCAC
GAGGACGGTA GTGTTGACTA CCCGGCGCTG CGAAAACTCA TCGATTGGCA TGTGGCCGAA
GGCACGGACT GCATCGGCGT GGTGGGAACG ACAGGTGAAT CCCCCACCGT CAACGTGGAG
GAGCACTGCG AAATCATCCG CGTGTCCGTC GAGCAGGCCG CGGGCCGCGT GCCCGTGATG
GCCGGCTGCG GCGCCAACAG CACGCACGAG GCCATCGAGC TGGCCCGCTA CGCCAAGAAG
GTCGGCGCCG ACAGCCAGCT GCAGGTCGTG CCCTACTACA ACAAGCCCAC GCAGGAAGGC
CAGTACCAGC ACTTCAAGGC GATTGCCGAA GCGGTGGGCG ACCTGCCCGT GGTGCTCTAC
AACGTGCCCG GCCGCTCCGT GGCCGACATG CAGCACGACA CCGTGCTGCG CCTGGCGCAG
ATCCCCGCCA TCATCGGCAT CAAGGAGGCC ACGGGCAACA TCGAGCGCGC CCAATGGCTG
ATCCGTGAAG TGCCCAAGGA CTTCGGCGTG TACTCCGGCG ATGATCCGAC CGCTGTGGCC
CTGATGCTGT GCGGCGGCCA CGGCAACATC AGCGTCACGG CCAACGTGGC ACCGCGCCTG
ATGAGCGATC TGTGCAAGGC GGCCCTGGCC GGCGATGTGC GCACCGCCAT GGACATCCAG
CTGCGCCTGA TGCCCGTGCA CAAGAACCTC TTCGTCGAGG CCAACCCCAT TCCCGTCAAG
TGGGCCGCAG CGCGCCTGGG CCTGTGCGGC CCGGCCATGC GCCTGCCGAT GACACCTCTG
AGCAAGAACC TGGAAGCCAC CGTGGAAGCC GCCCTGGGCT CCGCTGGCCT GCTGTGA
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| Protein sequence | MTSSSVALTG SIVALITPMH EDGSVDYPAL RKLIDWHVAE GTDCIGVVGT TGESPTVNVE
EHCEIIRVSV EQAAGRVPVM AGCGANSTHE AIELARYAKK VGADSQLQVV PYYNKPTQEG
QYQHFKAIAE AVGDLPVVLY NVPGRSVADM QHDTVLRLAQ IPAIIGIKEA TGNIERAQWL
IREVPKDFGV YSGDDPTAVA LMLCGGHGNI SVTANVAPRL MSDLCKAALA GDVRTAMDIQ
LRLMPVHKNL FVEANPIPVK WAAARLGLCG PAMRLPMTPL SKNLEATVEA ALGSAGLL
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