| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5086 |
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| Symbol | |
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| ID | 5750697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5640154 |
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| End bp | 5641380 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641300210 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001566100 |
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| Protein GI | 160900518 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.90358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0097128 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACAAAA ACAACCAACC CATGTCCATG GTGCAGATAC TGCTGTGCGG GGGCGCAGTC
GTGACGCTGT CCATGGGAAT CCGCCACGGC TTCGGCCTGT GGCTGCAGCC CATCACCCAG
GAGATGGGCT GGACGCGCGA GTCCTTCGCG CTGGCCATCG CCATCCAGAA CCTGTCCTGG
GGCGTGCTCG GCATCTTCGG CGGCATGCTG GCCGACCGCT TCGGCGCCTT CCGCGTGCTC
CTGGTGGGCG CGCTGCTGTA TGCGCTGGGC CTGGCCGGCA TGGCCATGGC GCCCACGACA
ACCTGGTTCG CCCTGACGGC CGGCGTGGTG ATCGGCGCAG CCCAGGCAGG CACCACCTAT
GCCGTGATCT ACGGTGTGCT GGGCCGCCAG ATTCCCGTGG CGCGGCGCAG CTGGGCCATG
GGCGTGACGG CGGCGGCGGG CTCCTTCGGC CAGTTCTTCA TGGTGCCCGT GGAAGGCAGC
CTGATTTCGA ACTTCGGCTG GTCCAACGCC CTGCTGCTGC TGTCGCTGTG CGCGCTGATG
ATCATTCCGC TGGCCTTCGG CCTGCGCGAG CCGGGCTTCC AGCCCGGCAA CGCCCGTCCC
GTGCGCGACC AGAGCGCGGG CCAGGCCGTC GCCGAAGCGC TGCGCACGCC CAGCTTCGTG
CTGCTGACGG CCGGCTACTT CGTCTGCGGC TTCCAGGTGA TGTTCATCGG CGTGCACATG
CCCAGCTACC TCAAGGACTA CGGCCTGGCA CCGCAGGTGG CCAGCATCTC GCTGGCGCTG
GTGGGGCTGT TCAACATCGT TGGCACCTAC GTGGCCGGCA ACCTGGGCCA GCGCCTGCCC
AAGCGCTACC TGCTGTCCAC CATCTACTTC ACGCGCTCGG TGGTGATCGT GCTCTTCCTG
CTGGCGCCGC TGACGCCGTG GTCGGTCTAC ATCTTCTCTG CCGCCATGGG CCTGCTGTGG
CTGTCCACCG TGCCGCTGAC CAACGCCACC GTGGCCCAGA TCTTCGGCGT GCAGCATCTG
TCCATGTTGA GCGGCATGGT GTTCTTCAGC CACCAGGTGG GCAGCTTCCT GGGCGTCTGG
CTGGGCGGCT ATCTCTATGA CCACACGGGC AGCTACCAGG TGGTCTGGTA CCTGGCCATC
GGCCTGGGCG TGGCCGCCGG CCTGCTGAAC CTGCCCATAC GCGAAGCCCC GGTGGCACGG
TTGCGCGCGG CCCAGGCCGC TGCCTGA
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| Protein sequence | MHKNNQPMSM VQILLCGGAV VTLSMGIRHG FGLWLQPITQ EMGWTRESFA LAIAIQNLSW
GVLGIFGGML ADRFGAFRVL LVGALLYALG LAGMAMAPTT TWFALTAGVV IGAAQAGTTY
AVIYGVLGRQ IPVARRSWAM GVTAAAGSFG QFFMVPVEGS LISNFGWSNA LLLLSLCALM
IIPLAFGLRE PGFQPGNARP VRDQSAGQAV AEALRTPSFV LLTAGYFVCG FQVMFIGVHM
PSYLKDYGLA PQVASISLAL VGLFNIVGTY VAGNLGQRLP KRYLLSTIYF TRSVVIVLFL
LAPLTPWSVY IFSAAMGLLW LSTVPLTNAT VAQIFGVQHL SMLSGMVFFS HQVGSFLGVW
LGGYLYDHTG SYQVVWYLAI GLGVAAGLLN LPIREAPVAR LRAAQAAA
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