| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5085 |
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| Symbol | |
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| ID | 5750696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5638011 |
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| End bp | 5639993 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300209 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001566099 |
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| Protein GI | 160900517 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0556284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0388476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTCA AACCATCTCC CACTTCCGCC AGCGAATACT CCGAAGGCTC GATACGCGTG
CTCAAGGGCC TTGAGCCCGT CAAGCAGCGT CCCGGCATGT ACACGCGCAC CGACAACCCC
CTGCACGTGC TGCAGGAGGT GATCGACAAC GCGGCCGACG AGGCCCTGGC CGGCTTCGGC
AAGAAAATCC GCTTCACCCT GCATTCCGAC GGCTCCTACA GCGTCGAAGA CGACGGCCGG
GGCATCCCCT TCGGCATGCA TCCCGAGGAA AAGGCGCCCG TGGTGGAGCT GGTCTTCACG
CGGCTGCATG CGGGCGGCAA GTTCGACAAG GGCAAGGGCG GCGCCTACAG CTTCTCGGGC
GGCCTGCACG GCGTGGGCGT CTCGGTCACG AATGCGCTGG CCACGCGCCT TGAGGCCTGC
ATCCACCGCG AGGGCAAGGT GGCCACCATC GCCTTCTCGG GCGGTGACGT GGTCGAGCCC
CTGCAGTCGC GGCCGCTGGC CGCGGGCGAA CGCAAGCAGG GCACGACCGT GCGCGTGTGG
CCCGATGCCC GCTATTTCGA ATCGCCCCAG CTGCCCATGG GCGAGCTGAT GCACCTGCTG
CGCAGCAAGG CCGTGCTCAT GCCCGGCGTG TCGGTGACCC TGGTCAACGA GAAGACGCGC
GACACCCAGA CCTGGCAGTT CAAGGGCGGC CTGCGCGACT ACCTGCAGCA AAGCCTGCAT
GGCGAGGCGG TCATCCCCCT GTTCGAGGGC GAAGGCTTTG CCGACCGCCA CCACGACAGC
TTTGCCGAAG GCGAGGGCGC CGCCTGGTGC GTGGCCTTCA CCGAGGACGG CGCACCGCTG
CGCGAAAGCT ATGTCAACCT GATCCCGACC ACCGCCGGCG GCACGCATGA CAGCGGCCTG
CGCGACGGCC TGTTCCAGGC GGTCAAGGCC TTCATCGAGA TGCACTCGCT GCTGCCCAAG
GGCGTCAAGC TCATGCCGGA CGACGTGTTT GCGCGCGCCA GCTATGTGCT CAACGCCAAG
GTGCTGGACC CGCAGTTCCA GGGCCAGATC AAGGAGCGCC TGAACTCGCG CGATGCCGTG
CGCCTGGTCA GCGGCTATGT GCGCCCCGCG CTGGAGCTGT GGCTCAACGA GCACGTGGAA
TGGGGCCGCA AGCTGGCCGA GATCGCCATC AAGGCCGCGC AGACCCGCCA GAAGGCGGGC
CAGAAGGTCG AAAAGCGCAA GGGCTCGGGC GTGGCCGTGC TGCCGGGCAA GCTCACCGAT
TGCGAAAGCC GCGACCTGAG CCTGAACGAG GTCTTCCTGG TCGAGGGCGA CTCGGCCGGC
GGCAGCGCCA AGATGGGCCG CAACAAGGAA ACCCAGGCCG TGCTGCCCCT GCGCGGCAAG
GTGCTCAACA CCTGGGAGGT GGATCGCGAC CGGCTGTTCG CCAACAACGA AATCCATGAC
ATCTCGGTGG CCATCGGCGT GGACCCGCAT GGCCCCAACG ACACGCCCGA CCTGTCGGGC
CTGCGCTACG GCAAGGTCTG CATTCTTTCG GATGCCGACG TGGACGGCTC GCACATCCAG
GTGCTGCTGC TGACGCTGTT CTTCCGCCAT TTCCCCAAGC TCATCGAGGC CGGCCACATC
CATGTGGCGT TGCCGCCGCT GTTTCGTGTG GACGTGCCTG CGCGCGGCAA GAAGCCTGCG
GCCAAGATGT ACGCGCTGGA CGAGGGCGAA CTGACCGCCA TCCTGGACAA ATCGGCCAAG
GACGGCGTGC CGCGCGAAAA ATGCCAGATC AGCCGCTTCA AGGGCCTGGG CGAGATGAAT
GCGGAGCAGC TGTGGGAAAC CACGCTCAAC CCCGACACGC GCCGCCTGCT GCCCGTGCAG
TTCATGAACC TGGACTTCGC GGCGGCCGAG CAGGTCGTCA CCAAGCTCAT GGGCAAGGGC
GAGGCCGCAG CGCGCCGCGA GCTCATGGAG CTCCATGGCG ACGCCATTGA AGTCGACATC
TGA
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| Protein sequence | MAVKPSPTSA SEYSEGSIRV LKGLEPVKQR PGMYTRTDNP LHVLQEVIDN AADEALAGFG
KKIRFTLHSD GSYSVEDDGR GIPFGMHPEE KAPVVELVFT RLHAGGKFDK GKGGAYSFSG
GLHGVGVSVT NALATRLEAC IHREGKVATI AFSGGDVVEP LQSRPLAAGE RKQGTTVRVW
PDARYFESPQ LPMGELMHLL RSKAVLMPGV SVTLVNEKTR DTQTWQFKGG LRDYLQQSLH
GEAVIPLFEG EGFADRHHDS FAEGEGAAWC VAFTEDGAPL RESYVNLIPT TAGGTHDSGL
RDGLFQAVKA FIEMHSLLPK GVKLMPDDVF ARASYVLNAK VLDPQFQGQI KERLNSRDAV
RLVSGYVRPA LELWLNEHVE WGRKLAEIAI KAAQTRQKAG QKVEKRKGSG VAVLPGKLTD
CESRDLSLNE VFLVEGDSAG GSAKMGRNKE TQAVLPLRGK VLNTWEVDRD RLFANNEIHD
ISVAIGVDPH GPNDTPDLSG LRYGKVCILS DADVDGSHIQ VLLLTLFFRH FPKLIEAGHI
HVALPPLFRV DVPARGKKPA AKMYALDEGE LTAILDKSAK DGVPREKCQI SRFKGLGEMN
AEQLWETTLN PDTRRLLPVQ FMNLDFAAAE QVVTKLMGKG EAAARRELME LHGDAIEVDI
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